RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 ZNF619Q8N2I2 560 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 GPR137CQ8N3F9 429 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 TMEM99Q8N816 258 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 Q8N9L7 120 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 IQUBQ8NA54 791 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 DRAXINQ8NBI3 349 aaPredicted RBP1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 SPC24Q8NBT2 197 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 CCDC148Q8NFR7 591 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 OR4F5Q8NH21 305 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 RXFP2Q8WXD0 754 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 MR1Q95460 341 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 MRPL24Q96A35 216 aaKnown RBP1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 BSCL2Q96G97 398 aaPredicted RBP1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 C16orf58Q96GQ5 468 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 C16orf74Q96GX8 76 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 PCED1BQ96HM7 432 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 CNDP1Q96KN2 507 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 C9orf72Q96LT7 481 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 CITED2Q99967 270 aaPredicted RBP1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 GSDMCQ9BYG8 508 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 WWP1Q9H0M0 922 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 AKIRIN1Q9H9L7 192 aaPredicted RBP1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 ELL3Q9HB65 397 aaPredicted RBP1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 SYTL2Q9HCH5 934 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 WRAP73Q9P2S5 460 aaPredicted RBP1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 LAMP5Q9UJQ1 280 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 HPCAL4Q9UM19 191 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 SCML2Q9UQR0 700 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 NOSIPQ9Y314 301 aaKnown RBP1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 MRPS2Q9Y399 296 aaKnown RBP1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 UBR4Q5T4S7 5183 aa1.5□□□□□ -2.17
SUB1P3-201ENST00000564581 LINC00854A0A1B0GVQ3 168 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 ANXA2P2A6NMY6 339 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 A8MXE2 369 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 UBXN8O00124 270 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 KIF2AO00139 706 aaPredicted RBP1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 CACNB4O00305 520 aaPredicted RBP1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 PDXKO00764 312 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 STX6O43752 255 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 GRAP2O75791 330 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 TM7SF2O76062 418 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 SLU7O95391 586 aaKnown RBP1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 PLEKHA8P1O95397 391 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 CLDN9O95484 217 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 JCHAINP01591 159 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 STATHP02808 62 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 HSPB1P04792 205 aaKnown RBP1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 CAPN1P07384 714 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 VIMP08670 466 aaKnown RBP1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 HBQ1P09105 142 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 FAM58BPP0C7Q3 252 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 NR2C1P13056 603 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 CCNB1P14635 433 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 PVRP15151 417 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 GCFC2P16383 781 aaKnown RBP1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 GAP43P17677 238 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 NELFEP18615 380 aaKnown RBP1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 MAPK3P27361 379 aaPredicted RBP1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 PRKCIP41743 596 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 SULT1E1P49888 294 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 ARHGDIAP52565 204 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 ACTG1P63261 375 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 ARG2P78540 354 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 VLDLRP98155 873 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 IL1RL1Q01638 556 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 ASAH1Q13510 395 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 CLEC12BQ2HXU8 276 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 WSCD2Q2TBF2 565 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 C2orf76Q3KRA6 126 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 IQCCQ4KMZ1 466 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 C10orf120Q5SQS8 335 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 NKAIN2Q5VXU1 208 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 FAM91A1Q658Y4 838 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 TTC19Q6DKK2 380 aaPredicted RBP1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 RAB12Q6IQ22 244 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 CAPN13Q6MZZ7 669 aaPredicted RBP1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 ALKBH5Q6P6C2 394 aaKnown RBP1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 FAM199XQ6PEV8 388 aaPredicted RBP1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 C2orf66Q6UXQ4 117 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 DNM1P46Q6ZS02 220 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 CCDC80Q76M96 950 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 STRADAQ7RTN6 431 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 PRSS48Q7RTY5 328 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 PRSS42Q7Z5A4 293 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 ANKRD46Q86W74 232 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 MKXQ8IYA7 352 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 OR8H3Q8N146 312 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 ARHGAP18Q8N392 663 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 C10orf53Q8N6V4 93 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 ZNF540Q8NDQ6 660 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 CATSPER1Q8NEC5 780 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 Q8NFD4 153 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 GDAP1Q8TB36 358 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 FAM57AQ8TBR7 257 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 SUN5Q8TC36 379 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 RNASE6Q93091 150 aaKnown RBP1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 MYLPFQ96A32 169 aa1.49□□□□□ -2.17
SUB1P3-201ENST00000564581 NRBF2Q96F24 287 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms