RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 PRSS23O95084 383 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 GSNP06396 782 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 ALDH3A1P30838 453 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 ACAA2P42765 397 aaKnown RBP8.84□□□□□ -0.99
SF3B3-204ENST00000563739 EVX1P49640 407 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 GYS2P54840 703 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 UBE2NP61088 152 aaKnown RBP8.84□□□□□ -0.99
SF3B3-204ENST00000563739 EGR4Q05215 589 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 SRSF4Q08170 494 aaKnown RBP8.84□□□□□ -0.99
SF3B3-204ENST00000563739 ZP4Q12836 540 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 NPRL3Q12980 569 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 OCLNQ16625 522 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 TTMPQ5BVD1 217 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 CFAP157Q5JU67 520 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 AVPI1Q5T686 147 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 SAXO2Q658L1 398 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 ZNF584Q8IVC4 421 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 KDM8Q8N371 416 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 ARFGAP2Q8N6H7 521 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 SIGLECL1Q8N7X8 197 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 ANKFN1Q8N957 763 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 RDH5Q92781 318 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 DDIT4LQ96D03 193 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 DUSP26Q9BV47 211 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 POLE3Q9NRF9 147 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 FZR1Q9UM11 496 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 CORINQ9Y5Q5 1042 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 SOX21Q9Y651 276 aaPredicted RBP8.84□□□□□ -0.99
SF3B3-204ENST00000563739 CACNG2Q9Y698 323 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 AGAP5A6NIR3 686 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 HMGN4O00479 90 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 TRAF3IP2O43734 574 aaPredicted RBP8.83□□□□□ -1
SF3B3-204ENST00000563739 TRIM13O60858 407 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 MPZL1O95297 269 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 HLA-HP01893 362 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 GPIP06744 558 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 BPGMP07738 259 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 FGF4P08620 206 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 NAT2P11245 290 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 G6PDP11413 515 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 PRG2P13727 222 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 FKBP2P26885 142 aaKnown RBP8.83□□□□□ -1
SF3B3-204ENST00000563739 MAGOHP61326 146 aaKnown RBP8.83□□□□□ -1
SF3B3-204ENST00000563739 MRPS11P82912 194 aaKnown RBP8.83□□□□□ -1
SF3B3-204ENST00000563739 FOXL1Q12952 345 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 MPP2Q14168 576 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 SYPL1Q16563 259 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 CEACAM16Q2WEN9 425 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 MRPL2Q5T653 305 aaKnown RBP8.83□□□□□ -1
SF3B3-204ENST00000563739 AGBL2Q5U5Z8 902 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 IL23RQ5VWK5 629 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 RHOUQ7L0Q8 258 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 DOK3Q7L591 496 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 C16orf62Q7Z3J2 963 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 GPAT4Q86UL3 456 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 BCL6BQ8N143 479 aaPredicted RBP8.83□□□□□ -1
SF3B3-204ENST00000563739 DEFB108BQ8NET1 73 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 FGFBP3Q8TAT2 258 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 JMJD8Q96S16 334 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 CRLF2Q9HC73 371 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 ZNF69Q9UC07 566 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 CMAHPQ9Y471 501 aa8.83□□□□□ -1
SF3B3-204ENST00000563739 BIRC6Q9NR09 4857 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 DSPPQ9NZW4 1301 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 DNAH9Q9NYC9 4486 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 TMEM120BA0PK00 339 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 HMGB1P1B2RPK0 211 aaPredicted RBP8.82□□□□□ -1
SF3B3-204ENST00000563739 PPIHO43447 177 aaKnown RBP8.82□□□□□ -1
SF3B3-204ENST00000563739 NPHS1O60500 1241 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 CLPTM1O96005 669 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 GKN3PP0CG01 181 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 PNMTP11086 282 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 MDKP21741 143 aaPredicted RBP8.82□□□□□ -1
SF3B3-204ENST00000563739 PRTN3P24158 256 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 ARR3P36575 388 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 HTR3AP46098 478 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 SH3BGRP55822 239 aaPredicted RBP8.82□□□□□ -1
SF3B3-204ENST00000563739 TMEM33P57088 247 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 KRTAP10-3P60369 221 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 MYBPC1Q00872 1141 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 LSM12Q3MHD2 195 aaKnown RBP8.82□□□□□ -1
SF3B3-204ENST00000563739 ZCCHC23Q6ZST2 131 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 ZNF627Q7L945 461 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 ABHD12BQ7Z5M8 362 aaPredicted RBP8.82□□□□□ -1
SF3B3-204ENST00000563739 ANKRD46Q86W74 232 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 DDIASQ8IXT1 998 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 PAQR4Q8N4S7 273 aaPredicted RBP8.82□□□□□ -1
SF3B3-204ENST00000563739 ANKK1Q8NFD2 765 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 XAGE5Q8WWM1 108 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 PMM1Q92871 262 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 NEURL3Q96EH8 262 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 ATP6V1G3Q96LB4 118 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 OR2M2Q96R28 347 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 KCNK9Q9NPC2 374 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.82□□□□□ -1
SF3B3-204ENST00000563739 RLIMQ9NVW2 624 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 ADPRHL2Q9NX46 363 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 PDP1Q9P0J1 537 aaPredicted RBP8.82□□□□□ -1
SF3B3-204ENST00000563739 RCE1Q9Y256 329 aa8.82□□□□□ -1
SF3B3-204ENST00000563739 IGLV3-9A0A075B6K5 115 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms