RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 TRIM64A6NGJ6 449 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 FAM183AA6NL82 134 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 AQP7P3A6NL99 342 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 KDM4EB2RXH2 506 aaPredicted RBP9.1□□□□□ -0.95
SMG1-208ENST00000563448 TFECO14948 347 aaPredicted RBP9.1□□□□□ -0.95
SMG1-208ENST00000563448 IDH3BO43837 385 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 RAMP1O60894 148 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 SERPINI2O75830 405 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 WISP2O76076 250 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 TXNDC12O95881 172 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 IGHMP01871 453 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 CCDC159P0C7I6 412 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 ZNF708P17019 499 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 NUDT6P53370 316 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 CSNK2A1P68400 391 aaPredicted RBP9.1□□□□□ -0.95
SMG1-208ENST00000563448 H3F3AP84243 136 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.1□□□□□ -0.95
SMG1-208ENST00000563448 PLEKHN1Q494U1 663 aaPredicted RBP9.1□□□□□ -0.95
SMG1-208ENST00000563448 HBMQ6B0K9 141 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 RPUSD3Q6P087 351 aaKnown RBP9.1□□□□□ -0.95
SMG1-208ENST00000563448 NHLRC1Q6VVB1 395 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 CPOQ8IVL8 374 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 SLC37A3Q8NCC5 494 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 OR52E2Q8NGJ4 325 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 OR4K13Q8NH42 304 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 OR2V1Q8NHB1 315 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 SGCDQ92629 289 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 ABTB1Q969K4 478 aaPredicted RBP9.1□□□□□ -0.95
SMG1-208ENST00000563448 LRR1Q96L50 414 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 ZNF582Q96NG8 517 aaPredicted RBP9.1□□□□□ -0.95
SMG1-208ENST00000563448 DDOQ99489 341 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 RHNO1Q9BSD3 238 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 NDEL1Q9GZM8 345 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 LDAHQ9H6V9 325 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 B3GAT1Q9P2W7 334 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 SPRR3Q9UBC9 169 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 KLHL21Q9UJP4 597 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 B3GNT3Q9Y2A9 372 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 MGAQ8IWI9 3026 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 NCOR2Q9Y618 2525 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 IGHV3-15A0A0B4J1V0 119 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 A0A1W2PNV4 684 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 SH3D21A4FU49 640 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 CXCL13O43927 109 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 FAM20BO75063 409 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 ACTL6AO96019 429 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 IGHG3P01860 377 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 SDHAP31040 664 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 CDKN2AP42771 156 aaKnown RBP9.09□□□□□ -0.95
SMG1-208ENST00000563448 CARD18P57730 90 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 RAC3P60763 192 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 DBPQ10586 325 aaPredicted RBP9.09□□□□□ -0.95
SMG1-208ENST00000563448 ITGADQ13349 1161 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 CRMP1Q14194 572 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 ACKR1Q16570 336 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 KCTD21Q4G0X4 260 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 MESTQ5EB52 335 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 AADACL4Q5VUY2 407 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 MEDAGQ5VYS4 303 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 VASNQ6EMK4 673 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 PAQR6Q6TCH4 344 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 ASB18Q6ZVZ8 466 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 CXXC5Q7LFL8 322 aaKnown RBP9.09□□□□□ -0.95
SMG1-208ENST00000563448 CYB561A3Q8NBI2 242 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 LSM14AQ8ND56 463 aaKnown RBP9.09□□□□□ -0.95
SMG1-208ENST00000563448 SDR9C7Q8NEX9 313 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 ANKK1Q8NFD2 765 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 BBS1Q8NFJ9 593 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 OR10D3Q8NH80 312 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 ZPLD1Q8TCW7 415 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 PTP4A1Q93096 173 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 Q96MT0 163 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 UCN2Q96RP3 112 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 HCAR1Q9BXC0 346 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 TSPAN10Q9H1Z9 355 aaPredicted RBP9.09□□□□□ -0.95
SMG1-208ENST00000563448 TXNIPQ9H3M7 391 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 FN3KQ9H479 309 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 MED20Q9H944 212 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 AMBNQ9NP70 447 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 ZNF71Q9NQZ8 489 aaPredicted RBP9.09□□□□□ -0.95
SMG1-208ENST00000563448 PAK1IP1Q9NWT1 392 aaPredicted RBP9.09□□□□□ -0.95
SMG1-208ENST00000563448 GRHPRQ9UBQ7 328 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 PHF3Q92576 2039 aaKnown RBP9.09□□□□□ -0.95
SMG1-208ENST00000563448 CACNA1GO43497 2377 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 TMEM8BA6NDV4 472 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 RIIAD1A6NNX1 92 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 DNPH1O43598 174 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 EIF1BO60739 113 aaKnown RBP9.09□□□□□ -0.95
SMG1-208ENST00000563448 FAM87AP0C7U9 286 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 SMIM18P0DKX4 95 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 ZNF3P17036 446 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 AGFG1P52594 562 aaKnown RBP9.09□□□□□ -0.95
SMG1-208ENST00000563448 CDH15P55291 814 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 RPL27P61353 136 aaKnown RBP9.09□□□□□ -0.95
SMG1-208ENST00000563448 POU3F1Q03052 451 aaPredicted RBP9.09□□□□□ -0.95
SMG1-208ENST00000563448 SRYQ05066 204 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 PIGFQ07326 219 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 MELKQ14680 651 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 NADK2Q4G0N4 442 aa9.09□□□□□ -0.95
SMG1-208ENST00000563448 EMC4Q5J8M3 183 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms