RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 RPS6KA6Q9UK32 745 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 CORINQ9Y5Q5 1042 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 ENPP4Q9Y6X5 453 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 SETD2Q9BYW2 2564 aaPredicted RBP7.52□□□□□ -1.21
UBR1-204ENST00000563239 TCRBV5S2A0A599 114 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 UPK3AO75631 287 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 PDE5AO76074 875 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 OR7A10O76100 309 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 PPP3CBP16298 524 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 FUT1P19526 365 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 MAKP20794 623 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 GTF2E2P29084 291 aaKnown RBP7.52□□□□□ -1.21
UBR1-204ENST00000563239 CLDN17P56750 224 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 ST3GAL3Q11203 375 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 ZP4Q12836 540 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 FAPQ12884 760 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 FOXD4Q12950 439 aaPredicted RBP7.52□□□□□ -1.21
UBR1-204ENST00000563239 PMS2P3Q13401 168 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 FHL1Q13642 323 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 TAB1Q15750 504 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 PHYHD1Q5SRE7 291 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 TBPL2Q6SJ96 375 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 FKBP9P1Q75LS8 142 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 BHLHA15Q7RTS1 189 aaPredicted RBP7.52□□□□□ -1.21
UBR1-204ENST00000563239 MEX3DQ86XN8 651 aaKnown RBP7.52□□□□□ -1.21
UBR1-204ENST00000563239 TMEM123Q8N131 208 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 ARHGAP24Q8N264 748 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 UBE2J2Q8N2K1 259 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 C10orf53Q8N6V4 93 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 STEAP2Q8NFT2 490 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 OR5J2Q8NH18 312 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 NRGNQ92686 78 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 KISS1RQ969F8 398 aaPredicted RBP7.52□□□□□ -1.21
UBR1-204ENST00000563239 ZC3HAV1LQ96H79 300 aaKnown RBP7.52□□□□□ -1.21
UBR1-204ENST00000563239 DHRS1Q96LJ7 313 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 NSMCE2Q96MF7 247 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 HS6ST2Q96MM7 605 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 MUS81Q96NY9 551 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 HS3ST6Q96QI5 342 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 OR2M2Q96R28 347 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 MED18Q9BUE0 208 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 ASPNQ9BXN1 380 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 SLCO5A1Q9H2Y9 848 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 LIME1Q9H400 295 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 NMNAT1Q9HAN9 279 aaPredicted RBP7.52□□□□□ -1.21
UBR1-204ENST00000563239 ASB6Q9NWX5 421 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 C6orf203Q9P0P8 240 aaPredicted RBP7.52□□□□□ -1.21
UBR1-204ENST00000563239 ACTR3BQ9P1U1 418 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 ZNF229Q9UJW7 825 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 SAMD4AQ9UPU9 718 aaKnown RBP7.52□□□□□ -1.21
UBR1-204ENST00000563239 RCE1Q9Y256 329 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 V9GYQ6 96 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 PRR14LQ5THK1 2151 aa7.52□□□□□ -1.21
UBR1-204ENST00000563239 MAP1AP78559 2803 aaPredicted RBP7.51□□□□□ -1.21
UBR1-204ENST00000563239 A0A087WUU8 490 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 hCG_2039718K7EN88 272 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 ACOT8O14734 319 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 DIRAS1O95057 198 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 NQO1P15559 274 aaKnown RBP7.51□□□□□ -1.21
UBR1-204ENST00000563239 ZNF43P17038 809 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 RHCEP18577 417 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 IL32P24001 234 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 DNAJA1P31689 397 aaKnown RBP7.51□□□□□ -1.21
UBR1-204ENST00000563239 POU3F1Q03052 451 aaPredicted RBP7.51□□□□□ -1.21
UBR1-204ENST00000563239 PRKCDQ05655 676 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 PUDPQ08623 228 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 BNIP1Q12981 228 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 C1DQ13901 141 aaKnown RBP7.51□□□□□ -1.21
UBR1-204ENST00000563239 TRIM25Q14258 630 aaKnown RBP7.51□□□□□ -1.21
UBR1-204ENST00000563239 TRAM2Q15035 370 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 GABRA6Q16445 453 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 C9orf135Q5VTT2 229 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 NIPAL3Q6P499 406 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 PGM2L1Q6PCE3 622 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 CYP2R1Q6VVX0 501 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 MBOAT2Q6ZWT7 520 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 PXKQ7Z7A4 578 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 CDC20BQ86Y33 519 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 UEVLDQ8IX04 471 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 NRMQ8IXM6 262 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 WDR31Q8NA23 367 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 POMGNT2Q8NAT1 580 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 MOSPD2Q8NHP6 518 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 SLC7A13Q8TCU3 470 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 ACOT11Q8WXI4 607 aaPredicted RBP7.51□□□□□ -1.21
UBR1-204ENST00000563239 HSD17B8Q92506 261 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 ZNF837Q96EG3 531 aaPredicted RBP7.51□□□□□ -1.21
UBR1-204ENST00000563239 SGTBQ96EQ0 304 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 BOD1Q96IK1 185 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 EMC6Q9BV81 110 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 FNDC11Q9BVV2 318 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 REPIN1Q9BWE0 567 aaKnown RBP7.51□□□□□ -1.21
UBR1-204ENST00000563239 POLDIP3Q9BY77 421 aaKnown RBP7.51□□□□□ -1.21
UBR1-204ENST00000563239 LINC00470Q9BZP3 86 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 CLEC4MQ9H2X3 399 aaPredicted RBP7.51□□□□□ -1.21
UBR1-204ENST00000563239 PLEKHF2Q9H8W4 249 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 NANSQ9NR45 359 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 MED29Q9NX70 200 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 ZNF226Q9NYT6 803 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 TAS2R16Q9NYV7 291 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms