RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 MGARPQ8TDB4 240 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 CKAP2Q8WWK9 683 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 KTI12Q96EK9 354 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-202ENST00000562722 OXGR1Q96P68 337 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 PTDSS2Q9BVG9 487 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 GPR35Q9HC97 309 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 SEC14L4Q9UDX3 406 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 IGHV2OR16-5A0A0B4J2B6 119 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 FTCDNL1E5RQL4 147 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 M0R082 166 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 M0R3G1 203 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 AIM2O14862 343 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 ADRA2AP08913 450 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 ZCCHC18P0CG32 403 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 NQO1P15559 274 aaKnown RBP11.24□□□□□ -0.61
SF3B3-202ENST00000562722 CBLP22681 906 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 GIFP27352 417 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 IL2RGP31785 369 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 CCNIQ14094 377 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 CARD17Q5XLA6 110 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 CDK20Q8IZL9 346 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 MREGQ8N565 214 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 ANKK1Q8NFD2 765 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 ZNF417Q8TAU3 575 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 UBASH3BQ8TF42 649 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 HPS1Q92902 700 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 SLC38A4Q969I6 547 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 MAL2Q969L2 176 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 VPS33AQ96AX1 596 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 ZNF587Q96SQ5 575 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-202ENST00000562722 DOK1Q99704 481 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 TPK1Q9H3S4 243 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 THAP1Q9NVV9 213 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 SELENONQ9NZV5 590 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 TMEFF2Q9UIK5 374 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-202ENST00000562722 USP22Q9UPT9 525 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 CHST2Q9Y4C5 530 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 ARFGEF3Q5TH69 2177 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 MALRD1Q5VYJ5 2156 aa11.24□□□□□ -0.61
SF3B3-202ENST00000562722 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.23□□□□□ -0.611e-11■■■■■ 30.2
SF3B3-202ENST00000562722 RPL36A-HNRNPH2H7BZ11 118 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 OR2T1O43869 369 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 ZNF432O94892 652 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 TACSTD2P09758 323 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 NUDT7P0C024 238 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 CD79AP11912 226 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 GRPRP30550 384 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 POLR2JP52435 117 aaKnown RBP11.23□□□□□ -0.61
SF3B3-202ENST00000562722 NCALDP61601 193 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 EGR4Q05215 589 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 TRIP10Q15642 601 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 FAM69AQ5T7M9 428 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 RINLQ6ZS11 566 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 MSANTD1Q6ZTZ1 278 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 UEVLDQ8IX04 471 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 CCDC36Q8IYA8 594 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 ZNF786Q8N393 782 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 RFLNBQ8N5W9 214 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 IL17RDQ8NFM7 739 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 BBS10Q8TAM1 723 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 TAAR8Q969N4 342 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 ZNF837Q96EG3 531 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-202ENST00000562722 OR2M2Q96R28 347 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 RAD21L1Q9H4I0 556 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 NOX3Q9HBY0 568 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 ZIM2Q9NZV7 527 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 B3GAT1Q9P2W7 334 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 CMAHPQ9Y471 501 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 NOX1Q9Y5S8 564 aa11.23□□□□□ -0.61
SF3B3-202ENST00000562722 TRAV36DV7A0A075B6V5 113 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 ZNF503-AS2A6NEH8 195 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 ZNF99A8MXY4 864 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-202ENST00000562722 SLCO1B7G3V0H7 640 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 LYNX1G3V0Z9 82 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 UBDO15205 165 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 LILRA1O75019 489 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 HLA-HP01893 362 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 LYNX1P0DP58 116 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 ITGA2P17301 1181 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 PCMT1P22061 227 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 GSG1Q2KHT4 349 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 ALG10BQ5I7T1 473 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 GKAP1Q5VSY0 366 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-202ENST00000562722 C5orf46Q6UWT4 87 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 H1FNTQ75WM6 255 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-202ENST00000562722 MIER2Q8N344 545 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 OR9I1Q8NGQ6 314 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 SLC35B4Q969S0 331 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 C1orf159Q96HA4 380 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 OCEL1Q9H607 264 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 A4GALTQ9NPC4 353 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 B3GAT2Q9NPZ5 323 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 POFUT2Q9Y2G5 429 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 SPEF1Q9Y4P9 236 aa11.22□□□□□ -0.61
SF3B3-202ENST00000562722 A0A1B0GWA3 101 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 TMEM129A0AVI4 362 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 TMEM120BA0PK00 339 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 M0R233 179 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 CLIC1O00299 241 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 SNNO75324 88 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms