RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 LOC102725191A0A1B0GVB3 256 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 J3KTA2 159 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 PLPP3O14495 311 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 MT-ATP6P00846 226 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 MPGP29372 298 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 POU3F1Q03052 451 aaPredicted RBP13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 PUDPQ08623 228 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 GKAP1Q5VSY0 366 aaPredicted RBP13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 NHLRC1Q6VVB1 395 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 ZNF704Q6ZNC4 412 aaPredicted RBP13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 SLC46A3Q7Z3Q1 461 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 UEVLDQ8IX04 471 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 PGAM4Q8N0Y7 254 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 OR5J2Q8NH18 312 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 OR52N5Q8NH56 324 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 NINJ1Q92982 152 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 PRRC1Q96M27 445 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 MUS81Q96NY9 551 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 USB1Q9BQ65 265 aaKnown RBP13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 TMEM204Q9BSN7 226 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 SLC19A3Q9BZV2 496 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 FKRPQ9H9S5 495 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 UBTD1Q9HAC8 227 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 MED29Q9NX70 200 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 RCE1Q9Y256 329 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 NF1P21359 2839 aa13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 HEATR1Q9H583 2144 aaKnown RBP13.51□□□□□ -0.25
CCNDBP1-203ENST00000562553 C11orf98E9PRG8 122 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 PIP5K1CO60331 668 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 SERPINI2O75830 405 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 RAF1P04049 648 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 CDH2P19022 906 aaPredicted RBP13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 TCN1P20061 433 aaPredicted RBP13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 DNASE1P24855 282 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 ART1P52961 327 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 NR1H2P55055 460 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 LSM11P83369 360 aaKnown RBP eCLIP13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 KRT72Q14CN4 511 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 IFI44LQ53G44 452 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 NCMAPQ5T1S8 102 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 GLYATQ6IB77 296 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 TMEM123Q8N131 208 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 WDR31Q8NA23 367 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 CCDC197Q8NCU1 140 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 TMEM239Q8WW34 195 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 GEMIN6Q8WXD5 167 aaKnown RBP13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 MUCL1Q96DR8 90 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 TXNDC15Q96J42 360 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 OR2M2Q96R28 347 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 EMC6Q9BV81 110 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 CXXC4Q9H2H0 198 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 NANSQ9NR45 359 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 C20orf141Q9NUB4 165 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 RHCGQ9UBD6 479 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 ADAM21Q9UKJ8 722 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 SLC25A15Q9Y619 301 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 VPS13CQ709C8 3753 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 MTORP42345 2549 aa13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 ZNF469Q96JG9 3925 aaPredicted RBP13.5□□□□□ -0.25
CCNDBP1-203ENST00000562553 ZFHX3Q15911 3703 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 DPRXA6NFQ7 191 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 ZNF587BE7ETH6 402 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 FFAR1O14842 300 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 SLC43A1O75387 559 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 KRT33AO76009 404 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 MT-ND1P03886 318 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 IFNW1P05000 195 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 ASAH2BP0C7U1 165 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 ADORA3P0DMS8 318 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 THRBP10828 461 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 CD53P19397 219 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 AHCYP23526 432 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 MSX2P35548 267 aaPredicted RBP13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 RBM34P42696 430 aaKnown RBP13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 BSPH1Q075Z2 132 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 KEAP1Q14145 624 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 PHYHD1Q5SRE7 291 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 CARD17Q5XLA6 110 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 OR7E24Q6IFN5 339 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 FKBP9P1Q75LS8 142 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 TSEN54Q7Z6J9 526 aaKnown RBP13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 P2RY8Q86VZ1 359 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 DEFB107AQ8IZN7 70 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 FAM86B1Q8N7N1 296 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 C1orf162Q8NEQ5 155 aaPredicted RBP13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 CDRT15Q96T59 188 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 FOXC2Q99958 501 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 LINC00470Q9BZP3 86 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 SLC17A5Q9NRA2 495 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 MAN2C1Q9NTJ4 1040 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 TAS2R5Q9NYW4 299 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 CD300AQ9UGN4 299 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 ZNF229Q9UJW7 825 aa13.49□□□□□ -0.25
CCNDBP1-203ENST00000562553 PLCE1Q9P212 2302 aa13.48□□□□□ -0.25
CCNDBP1-203ENST00000562553 SLC35F4A4IF30 521 aa13.48□□□□□ -0.25
CCNDBP1-203ENST00000562553 OR6C65A6NJZ3 312 aa13.48□□□□□ -0.25
CCNDBP1-203ENST00000562553 CLOCKO15516 846 aa13.48□□□□□ -0.25
CCNDBP1-203ENST00000562553 OR7A10O76100 309 aa13.48□□□□□ -0.25
CCNDBP1-203ENST00000562553 PRSS23O95084 383 aa13.48□□□□□ -0.25
CCNDBP1-203ENST00000562553 UMPSP11172 480 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms