RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 GPR52Q9Y2T5 361 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 BSNQ9UPA5 3926 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 PRRC2CQ9Y520 2896 aaKnown RBP10.91□□□□□ -0.66
HERC1-205ENST00000559886 ZNF814B7Z6K7 855 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 IGHMP01871 453 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 CCDC159P0C7I6 412 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 FAM87AP0C7U9 286 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 HIST1H1CP16403 213 aaKnown RBP10.91□□□□□ -0.66
HERC1-205ENST00000559886 SDHAP31040 664 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 AGFG1P52594 562 aaKnown RBP10.91□□□□□ -0.66
HERC1-205ENST00000559886 CARD18P57730 90 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 EMC4Q5J8M3 183 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 GPR139Q6DWJ6 353 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 PXKQ7Z7A4 578 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 KDM8Q8N371 416 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 ANKK1Q8NFD2 765 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 OR10D3Q8NH80 312 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 LRR1Q96L50 414 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 Q96M85 177 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 Q96MT0 163 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 FN3KQ9H479 309 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 ZNF696Q9H7X3 374 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 B3GAT1Q9P2W7 334 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 PIEZO2Q9H5I5 2752 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 LOC102725191A0A1B0GVB3 256 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 SH3D21A4FU49 640 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 MAGEA13PA6NCF6 341 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 TRIM64A6NGJ6 449 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 NPIPB13A6NJU9 1138 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 RIIAD1A6NNX1 92 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 NPIPB4C9JG80 1138 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 SLC1A7O00341 560 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 IFNGP01579 166 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 HLA-DOBP13765 273 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 CRHBPP24387 322 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 CSNK2BP67870 215 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 TOP3AQ13472 1001 aaPredicted RBP10.91□□□□□ -0.66
HERC1-205ENST00000559886 MEDAGQ5VYS4 303 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 NHLRC1Q6VVB1 395 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 SIAH3Q8IW03 269 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 BPIFB6Q8NFQ5 453 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 C9orf43Q8TAL5 461 aaPredicted RBP10.91□□□□□ -0.66
HERC1-205ENST00000559886 RASD2Q96D21 266 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 CRELD1Q96HD1 420 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 TSPAN32Q96QS1 320 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 NAA11Q9BSU3 229 aaPredicted RBP10.91□□□□□ -0.66
HERC1-205ENST00000559886 SRXN1Q9BYN0 137 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 TXNIPQ9H3M7 391 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 GRHPRQ9UBQ7 328 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 KLHL21Q9UJP4 597 aa10.91□□□□□ -0.66
HERC1-205ENST00000559886 DSPP15924 2871 aaKnown RBP10.9□□□□□ -0.66
HERC1-205ENST00000559886 TEX13CA0A0J9YWL9 993 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 A0A1W2PRG6 482 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 ENTPD6O75354 484 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 ZNF3P17036 446 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 KLK2P20151 261 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 RPL27P61353 136 aaKnown RBP10.9□□□□□ -0.66
HERC1-205ENST00000559886 ITGADQ13349 1161 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 ACKR1Q16570 336 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 KCTD21Q4G0X4 260 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 PDSS1Q5T2R2 415 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 BCDIN3DQ7Z5W3 292 aaKnown RBP10.9□□□□□ -0.66
HERC1-205ENST00000559886 LSM14AQ8ND56 463 aaKnown RBP10.9□□□□□ -0.66
HERC1-205ENST00000559886 OR52E2Q8NGJ4 325 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 OR4K13Q8NH42 304 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 ZHX1-C8orf76Q96EF9 292 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 OXGR1Q96P68 337 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 ARHGAP9Q9BRR9 750 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 TSPAN10Q9H1Z9 355 aaPredicted RBP10.9□□□□□ -0.66
HERC1-205ENST00000559886 PRORYQ9H606 182 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 EXO5Q9H790 373 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 TIGARQ9NQ88 270 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 HINT3Q9NQE9 182 aaKnown RBP10.9□□□□□ -0.66
HERC1-205ENST00000559886 ZNF71Q9NQZ8 489 aaPredicted RBP10.9□□□□□ -0.66
HERC1-205ENST00000559886 PLCXD1Q9NUJ7 323 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 DNAJC27Q9NZQ0 273 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 SPRR3Q9UBC9 169 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 ZNF346Q9UL40 294 aaKnown RBP10.9□□□□□ -0.66
HERC1-205ENST00000559886 RASD1Q9Y272 281 aa10.9□□□□□ -0.66
HERC1-205ENST00000559886 A0A1B0GVC2 190 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 KDM4EB2RXH2 506 aaPredicted RBP10.9□□□□□ -0.67
HERC1-205ENST00000559886 XPNPEP2O43895 674 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 CXCL13O43927 109 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 RAMP1O60894 148 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 SERPINI2O75830 405 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 SMNDC1O75940 238 aaKnown RBP eCLIP10.9□□□□□ -0.67
HERC1-205ENST00000559886 PLGP00747 810 aaPredicted RBP10.9□□□□□ -0.67
HERC1-205ENST00000559886 EIF1AXP47813 144 aaKnown RBP10.9□□□□□ -0.67
HERC1-205ENST00000559886 HSF1Q00613 529 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.9□□□□□ -0.67
HERC1-205ENST00000559886 CRMP1Q14194 572 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 NADK2Q4G0N4 442 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 AADACL4Q5VUY2 407 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 TMEM225Q6GV28 225 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 CXXC5Q7LFL8 322 aaKnown RBP10.9□□□□□ -0.67
HERC1-205ENST00000559886 CPOQ8IVL8 374 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 MEIOBQ8N635 442 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 ARIH2OSQ8N7S6 290 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 SLC37A3Q8NCC5 494 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 NPEPL1Q8NDH3 523 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms