RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 UEVLDQ8IX04 471 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 POMGNT2Q8NAT1 580 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 FAM156AQ8NDB6 213 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 OR6S1Q8NH40 331 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 FAM162AQ96A26 154 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 MBD6Q96DN6 1003 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 ZNF837Q96EG3 531 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 OR2M2Q96R28 347 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 CCL19Q99731 98 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 KCTD14Q9BQ13 255 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 ESRP2Q9H6T0 727 aaKnown RBP13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 MEPEQ9NQ76 525 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 SLC17A5Q9NRA2 495 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 MRPL39Q9NYK5 338 aaKnown RBP13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 ADA2Q9NZK5 511 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 RHCGQ9UBD6 479 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 AP3M1Q9Y2T2 418 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 A0A096LPE4 126 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 A0A1W2PPZ6 126 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 ZNF587BE7ETH6 402 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 J3KTA2 159 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 PLPP3O14495 311 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 PIP5K1CO60331 668 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 SEC14L2O76054 403 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 ZNF432O94892 652 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 SERPINA1P01009 418 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 ADORA3P0DMS8 318 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 UMPSP11172 480 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 LSM11P83369 360 aaKnown RBP eCLIP13.01□□□□□ -0.333e-9■□□□□ 10.4
RABGGTA-211ENST00000559850 ROR2Q01974 943 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 MFSD13AQ14CX5 517 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 MEX3DQ86XN8 651 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 SCAIQ8N9R8 606 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 ADPRHL1Q8NDY3 354 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 OR5J2Q8NH18 312 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 MPP4Q96JB8 637 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 USB1Q9BQ65 265 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 ZNF426Q9BUY5 554 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 AMBRA1Q9C0C7 1298 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 CXXC4Q9H2H0 198 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 NGBQ9NPG2 151 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 C20orf141Q9NUB4 165 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 ABCD2Q9UBJ2 740 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 CORINQ9Y5Q5 1042 aa13.01□□□□□ -0.33
RABGGTA-211ENST00000559850 CELSR1Q9NYQ6 3014 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 M0R3G1 203 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 ABCD4O14678 606 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 HS3ST1O14792 307 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 SLC43A1O75387 559 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 OR5F1O95221 314 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 FUT1P19526 365 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 TCN1P20061 433 aaPredicted RBP13□□□□□ -0.33
RABGGTA-211ENST00000559850 MSX2P35548 267 aaPredicted RBP13□□□□□ -0.33
RABGGTA-211ENST00000559850 PUDPQ08623 228 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 CAMK2DQ13557 499 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 OR7E24Q6IFN5 339 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 NHLRC1Q6VVB1 395 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 SPNS3Q6ZMD2 512 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 SLC46A3Q7Z3Q1 461 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 P2RY8Q86VZ1 359 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 TMEM123Q8N131 208 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 PIAS4Q8N2W9 510 aaPredicted RBP13□□□□□ -0.33
RABGGTA-211ENST00000559850 OR1K1Q8NGR3 316 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 HSH2DQ96JZ2 352 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 LRRC37BQ96QE4 947 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 ALPK1Q96QP1 1244 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 CCT8L2Q96SF2 557 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 NANSQ9NR45 359 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 TAS2R5Q9NYW4 299 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 A4GNTQ9UNA3 340 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 RCE1Q9Y256 329 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 V9GYQ6 96 aa13□□□□□ -0.33
RABGGTA-211ENST00000559850 ROS1P08922 2347 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 SLC35F4A4IF30 521 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 OR6A2O95222 327 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 MT-ATP6P00846 226 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 ARF1P84077 181 aaKnown RBP12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 TGFBR3Q03167 851 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 MELKQ14680 651 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 CEACAM16Q2WEN9 425 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 TBRG1Q3YBR2 411 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 HMBOX1Q6NT76 420 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 C20orf204Q6ZNR8 217 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 CBLL1Q75N03 491 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 GPR137CQ8N3F9 429 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 C1orf162Q8NEQ5 155 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 TMEM239Q8WW34 195 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 LZICQ8WZA0 190 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 BCL2L2Q92843 193 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 PERPQ96FX8 193 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 PRRC1Q96M27 445 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 LINC00470Q9BZP3 86 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 NELFAQ9H3P2 528 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 FKRPQ9H9S5 495 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 GPR35Q9HC97 309 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 SPAG4Q9NPE6 437 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 BEX4Q9NWD9 120 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 TAGLN3Q9UI15 199 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 NOX1Q9Y5S8 564 aa12.99□□□□□ -0.33
RABGGTA-211ENST00000559850 CADP27708 2225 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms