RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 ZNF99A8MXY4 864 aaPredicted RBP7.93□□□□□ -1.14
HDDC3-204ENST00000559834 B4DSR2 109 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 FTCDNL1E5RQL4 147 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 SDHDO14521 159 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 ZNF432O94892 652 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 ADRA2AP08913 450 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 NR4A1P22736 598 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 MVDP53602 400 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 DVL1P1P54792 670 aaPredicted RBP7.93□□□□□ -1.14
HDDC3-204ENST00000559834 CDH15P55291 814 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 IL1RL1Q01638 556 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 BST1Q10588 318 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 SCGB2A2Q13296 93 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 MFSD13AQ14CX5 517 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 FAM69AQ5T7M9 428 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 HHATQ5VTY9 493 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 REP15Q6BDI9 236 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 NXNQ6DKJ4 435 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 C12orf54Q6X4T0 127 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 SERPINA11Q86U17 422 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 ZCCHC24Q8N2G6 241 aaKnown RBP7.93□□□□□ -1.14
HDDC3-204ENST00000559834 AENQ8WTP8 325 aaKnown RBP7.93□□□□□ -1.14
HDDC3-204ENST00000559834 DNAJA4Q8WW22 397 aaPredicted RBP7.93□□□□□ -1.14
HDDC3-204ENST00000559834 SLC38A4Q969I6 547 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 KTI12Q96EK9 354 aaPredicted RBP7.93□□□□□ -1.14
HDDC3-204ENST00000559834 C1orf159Q96HA4 380 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 TMEM19Q96HH6 336 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 ITCHQ96J02 903 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 SNX18Q96RF0 628 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 SOX7Q9BT81 388 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 NELFAQ9H3P2 528 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 RAD21L1Q9H4I0 556 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 OCEL1Q9H607 264 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 DENND2DQ9H6A0 471 aaPredicted RBP7.93□□□□□ -1.14
HDDC3-204ENST00000559834 B3GAT2Q9NPZ5 323 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 THAP1Q9NVV9 213 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 SELENONQ9NZV5 590 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 REV1Q9UBZ9 1251 aa7.93□□□□□ -1.14
HDDC3-204ENST00000559834 C5orf58C9J3I9 102 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 M0R3G1 203 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 SYNGR3O43761 229 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 CELA3BP08861 270 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 CD79AP11912 226 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 ETS2P15036 469 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 EPHA3P29320 983 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 TMEM33P57088 247 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 EGR4Q05215 589 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 SNTB2Q13425 540 aaKnown RBP7.92□□□□□ -1.14
HDDC3-204ENST00000559834 RIN1Q13671 783 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 RGNQ15493 299 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 GSG1Q2KHT4 349 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 TRMT5Q32P41 509 aaKnown RBP7.92□□□□□ -1.14
HDDC3-204ENST00000559834 SLC9B1Q4ZJI4 515 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 RPS26P11Q5JNZ5 115 aaPredicted RBP7.92□□□□□ -1.14
HDDC3-204ENST00000559834 C6orf10Q5SRN2 563 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 KRT80Q6KB66 452 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 WDR93Q6P2C0 686 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 C6orf89Q6UWU4 347 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 MSANTD1Q6ZTZ1 278 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 CROCCP2Q86T23 111 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 MDP1Q86V88 176 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 GLCCI1Q86VQ1 547 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 UEVLDQ8IX04 471 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 MREGQ8N565 214 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 TEX29Q8N6K0 151 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 LSMEM1Q8N8F7 131 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 BBS10Q8TAM1 723 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 MGARPQ8TDB4 240 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 ZFAND2BQ8WV99 257 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 MRPL24Q96A35 216 aaKnown RBP7.92□□□□□ -1.14
HDDC3-204ENST00000559834 LRR1Q96L50 414 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 EPYCQ99645 322 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 PTDSS2Q9BVG9 487 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 CENPHQ9H3R5 247 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 WDR55Q9H6Y2 383 aaPredicted RBP7.92□□□□□ -1.14
HDDC3-204ENST00000559834 SEC61A2Q9H9S3 476 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 NOX3Q9HBY0 568 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 BCL2L10Q9HD36 194 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 ZIM2Q9NZV7 527 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 B3GAT1Q9P2W7 334 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 POFUT2Q9Y2G5 429 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 CHST2Q9Y4C5 530 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 CORINQ9Y5Q5 1042 aa7.92□□□□□ -1.14
HDDC3-204ENST00000559834 TRAV36DV7A0A075B6V5 113 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 ZNF726A6NNF4 738 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 M0R082 166 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 M0R233 179 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 CLIC1O00299 241 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 FZD7O75084 574 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 ENTPD5O75356 428 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 KITP10721 976 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 ANPEPP15144 967 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 NQO1P15559 274 aaKnown RBP7.91□□□□□ -1.14
HDDC3-204ENST00000559834 ITGA2P17301 1181 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 GRPRP30550 384 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 IL2RGP31785 369 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 LSP1P33241 339 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 GLRXP35754 106 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 GPR6P46095 362 aaPredicted RBP7.91□□□□□ -1.14
HDDC3-204ENST00000559834 POLR2JP52435 117 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms