RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 PLSCR5A0PG75 271 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 TMEM72A0PK05 275 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 ZNF503-AS2A6NEH8 195 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 ZNF99A8MXY4 864 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-211ENST00000559460 TMEM229AB2RXF0 380 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 NPIPB9F8W1W9 429 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 AKAP10O43572 662 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 AKAP8O43823 692 aaKnown RBP8.16□□□□□ -1.1
SMAD3-211ENST00000559460 STX11O75558 287 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 CRCPO75575 148 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 URI1O94763 535 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-211ENST00000559460 AK1P00568 194 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 ENO1P06733 434 aaKnown RBP8.16□□□□□ -1.1
SMAD3-211ENST00000559460 CHRM4P08173 479 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 MELTFP08582 738 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 OR8G3PP0DMU2 310 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 MAKP20794 623 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 GTF2E2P29084 291 aaKnown RBP8.16□□□□□ -1.1
SMAD3-211ENST00000559460 IDH2P48735 452 aaKnown RBP8.16□□□□□ -1.1
SMAD3-211ENST00000559460 ZNF81P51508 661 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 GNB2P62879 340 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 RBBP4Q09028 425 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 ZNF141Q15928 474 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 TEX35Q5T0J7 233 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 DHRS7BQ6IAN0 325 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-211ENST00000559460 TET2Q6N021 2002 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-211ENST00000559460 CREB3L2Q70SY1 520 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 VASH1Q7L8A9 365 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-211ENST00000559460 KLHL7Q8IXQ5 586 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 PIK3C3Q8NEB9 887 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 LRTOMTQ8WZ04 291 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 THOC1Q96FV9 657 aaKnown RBP8.16□□□□□ -1.1
SMAD3-211ENST00000559460 ZNF764Q96H86 408 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-211ENST00000559460 GPR78Q96P69 363 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 DCLRE1CQ96SD1 692 aaKnown RBP8.16□□□□□ -1.1
SMAD3-211ENST00000559460 PRDM13Q9H4Q3 707 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 DENND2DQ9H6A0 471 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-211ENST00000559460 REEP4Q9H6H4 257 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 PATZ1Q9HBE1 687 aaKnown RBP8.16□□□□□ -1.1
SMAD3-211ENST00000559460 GPR35Q9HC97 309 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 NPHS2Q9NP85 383 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 RRAGDQ9NQL2 400 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-211ENST00000559460 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-211ENST00000559460 EGFL7Q9UHF1 273 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 ZNF225Q9UK10 706 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 RASD1Q9Y272 281 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 PCDHGB5Q9Y5G0 923 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 NPTNQ9Y639 398 aa8.16□□□□□ -1.1
SMAD3-211ENST00000559460 BTBD17A6NE02 478 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 A8MT66 165 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 A8MXK9 166 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 GPR37O15354 613 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 EIF3HO15372 352 aaKnown RBP eCLIP8.15□□□□□ -1.15e-6■□□□□ 8.9
SMAD3-211ENST00000559460 SPRY3O43610 288 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 SEC22BO75396 215 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 CLPTM1O96005 669 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 OR12D1P0DN82 309 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 ZNF14P17017 642 aaPredicted RBP8.15□□□□□ -1.1
SMAD3-211ENST00000559460 ZNF43P17038 809 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 TAC1P20366 129 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 EFNA1P20827 205 aaPredicted RBP8.15□□□□□ -1.1
SMAD3-211ENST00000559460 SLC6A9P48067 706 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 CCT3P49368 545 aaKnown RBP8.15□□□□□ -1.1
SMAD3-211ENST00000559460 PKNOX1P55347 436 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 CLDN17P56750 224 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 GLO1Q04760 184 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 PAX8Q06710 450 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 EGR3Q06889 387 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 CALCOCO2Q13137 446 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 C1DQ13901 141 aaKnown RBP8.15□□□□□ -1.1
SMAD3-211ENST00000559460 HERPUD1Q15011 391 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 C16orf62Q7Z3J2 963 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 SNX32Q86XE0 403 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 NEURL3Q96EH8 262 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 EGLN2Q96KS0 407 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 SDF2Q99470 211 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 MRPL46Q9H2W6 279 aaKnown RBP8.15□□□□□ -1.1
SMAD3-211ENST00000559460 OR51B6Q9H340 312 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 CENPHQ9H3R5 247 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 CDH20Q9HBT6 801 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 B3GAT2Q9NPZ5 323 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 MKLN1Q9UL63 735 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 TRIM33Q9UPN9 1127 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 RCE1Q9Y256 329 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 LRCH1Q9Y2L9 728 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 TIMM22Q9Y584 194 aa8.15□□□□□ -1.1
SMAD3-211ENST00000559460 TENM3Q9P273 2699 aa8.15□□□□□ -1.11
SMAD3-211ENST00000559460 LIPT2A6NK58 231 aa8.14□□□□□ -1.11
SMAD3-211ENST00000559460 DUXAA6NLW8 204 aa8.14□□□□□ -1.11
SMAD3-211ENST00000559460 H0YL77 283 aa8.14□□□□□ -1.11
SMAD3-211ENST00000559460 UGT2B17O75795 530 aa8.14□□□□□ -1.11
SMAD3-211ENST00000559460 UBL3O95164 117 aa8.14□□□□□ -1.11
SMAD3-211ENST00000559460 PPP1R3DO95685 299 aa8.14□□□□□ -1.11
SMAD3-211ENST00000559460 UQCRC2P22695 453 aa8.14□□□□□ -1.11
SMAD3-211ENST00000559460 CXCR1P25024 350 aa8.14□□□□□ -1.11
SMAD3-211ENST00000559460 TACR3P29371 465 aa8.14□□□□□ -1.11
SMAD3-211ENST00000559460 CD80P33681 288 aa8.14□□□□□ -1.11
SMAD3-211ENST00000559460 FRKP42685 505 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-211ENST00000559460 GIPRP48546 466 aa8.14□□□□□ -1.11
SMAD3-211ENST00000559460 SEC61A1P61619 476 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms