RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 DNAJB9Q9UBS3 223 aa19.23■□□□□ 0.67
SNX1-206ENST00000559389 NOX1Q9Y5S8 564 aa19.23■□□□□ 0.67
SNX1-206ENST00000559389 C11orf98E9PRG8 122 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 DEAF1O75398 565 aaPredicted RBP19.22■□□□□ 0.67
SNX1-206ENST00000559389 CCNB2O95067 398 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 OR6A2O95222 327 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 HLA-DOBP13765 273 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 ZNF43P17038 809 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 EDNRAP25101 427 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 IFNGR2P38484 337 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 IST1P53990 364 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 TFF3Q07654 80 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 FHL1Q13642 323 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 C1DQ13901 141 aaKnown RBP19.22■□□□□ 0.67
SNX1-206ENST00000559389 ATP6AP1Q15904 470 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 ANKDD1AQ495B1 522 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 CASP12Q6UXS9 341 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 NHLRC1Q6VVB1 395 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 PXKQ7Z7A4 578 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 LINC00471Q8N535 108 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 ANKK1Q8NFD2 765 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 GPA33Q99795 319 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 KCNJ16Q9NPI9 418 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 RCE1Q9Y256 329 aa19.22■□□□□ 0.67
SNX1-206ENST00000559389 TRAV27A0A087WT01 109 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 ARRDC5A6NEK1 342 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 A8MXE2 369 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 BLOC1S5-TXNDC5H3BN57 136 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 GNGT2O14610 69 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 CLOCKO15516 846 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 HNRNPRO43390 633 aaKnown RBP19.21■□□□□ 0.67
SNX1-206ENST00000559389 FCGR1AP12314 374 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 AHCYP23526 432 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 FPR3P25089 353 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 AQP2P41181 271 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 LAPTM4AQ15012 233 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 C1orf94Q6P1W5 598 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 ZFP1Q6P2D0 407 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 LUZP2Q86TE4 346 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 OAFQ86UD1 273 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 ZNF610Q8N9Z0 462 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 MOSPD2Q8NHP6 518 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 PYDC1Q8WXC3 89 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 MCCC2Q9HCC0 563 aa19.21■□□□□ 0.67
SNX1-206ENST00000559389 KLF2Q9Y5W3 355 aaPredicted RBP19.21■□□□□ 0.67
SNX1-206ENST00000559389 HELZ2Q9BYK8 2649 aaKnown RBP19.2■□□□□ 0.66
SNX1-206ENST00000559389 ANKRD65E5RJM6 399 aa19.2■□□□□ 0.66
SNX1-206ENST00000559389 H3BNX3 289 aa19.2■□□□□ 0.66
SNX1-206ENST00000559389 RNF13O43567 381 aa19.2■□□□□ 0.66
SNX1-206ENST00000559389 MRPL33O75394 65 aaKnown RBP19.2■□□□□ 0.66
SNX1-206ENST00000559389 DNAJA1P31689 397 aaKnown RBP19.2■□□□□ 0.66
SNX1-206ENST00000559389 GSSP48637 474 aa19.2■□□□□ 0.66
SNX1-206ENST00000559389 CLDN17P56750 224 aa19.2■□□□□ 0.66
SNX1-206ENST00000559389 MICAQ29983 383 aa19.2■□□□□ 0.66
SNX1-206ENST00000559389 ZNF474Q6S9Z5 364 aaPredicted RBP19.2■□□□□ 0.66
SNX1-206ENST00000559389 AAED1Q7RTV5 226 aa19.2■□□□□ 0.66
SNX1-206ENST00000559389 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.2■□□□□ 0.66
SNX1-206ENST00000559389 TMEM179BQ7Z7N9 219 aa19.2■□□□□ 0.66
SNX1-206ENST00000559389 STK32CQ86UX6 486 aa19.2■□□□□ 0.66
SNX1-206ENST00000559389 OR10G2Q8NGC3 310 aa19.2■□□□□ 0.66
SNX1-206ENST00000559389 OR51A7Q8NH64 312 aa19.2■□□□□ 0.66
SNX1-206ENST00000559389 APH1AQ96BI3 265 aa19.2■□□□□ 0.66
SNX1-206ENST00000559389 NTN4Q9HB63 628 aa19.2■□□□□ 0.66
SNX1-206ENST00000559389 SIGLEC7Q9Y286 467 aa19.2■□□□□ 0.66
SNX1-206ENST00000559389 DOPEY1Q5JWR5 2465 aa19.2■□□□□ 0.66
SNX1-206ENST00000559389 PCNX1Q96RV3 2341 aa19.19■□□□□ 0.66
SNX1-206ENST00000559389 USP9XQ93008 2570 aaPredicted RBP19.19■□□□□ 0.66
SNX1-206ENST00000559389 AKAP8O43823 692 aaKnown RBP19.19■□□□□ 0.66
SNX1-206ENST00000559389 ENTPD5O75356 428 aa19.19■□□□□ 0.66
SNX1-206ENST00000559389 E2F6O75461 281 aa19.19■□□□□ 0.66
SNX1-206ENST00000559389 SERPINI2O75830 405 aa19.19■□□□□ 0.66
SNX1-206ENST00000559389 CLDN1O95832 211 aa19.19■□□□□ 0.66
SNX1-206ENST00000559389 FASP25445 335 aa19.19■□□□□ 0.66
SNX1-206ENST00000559389 ZBED5Q49AG3 693 aa19.19■□□□□ 0.66
SNX1-206ENST00000559389 ALG10Q5BKT4 473 aa19.19■□□□□ 0.66
SNX1-206ENST00000559389 ZNF100Q8IYN0 542 aa19.19■□□□□ 0.66
SNX1-206ENST00000559389 LRRC75AQ8NAA5 344 aa19.19■□□□□ 0.66
SNX1-206ENST00000559389 AQP11Q8NBQ7 271 aa19.19■□□□□ 0.66
SNX1-206ENST00000559389 GNPDA2Q8TDQ7 276 aa19.19■□□□□ 0.66
SNX1-206ENST00000559389 RNASE6Q93091 150 aaKnown RBP19.19■□□□□ 0.66
SNX1-206ENST00000559389 RBM24Q9BX46 236 aaKnown RBP19.19■□□□□ 0.66
SNX1-206ENST00000559389 NPDC1Q9NQX5 325 aaPredicted RBP19.19■□□□□ 0.66
SNX1-206ENST00000559389 INIPQ9NRY2 104 aa19.19■□□□□ 0.66
SNX1-206ENST00000559389 PARPBPQ9NWS1 579 aa19.19■□□□□ 0.66
SNX1-206ENST00000559389 MED29Q9NX70 200 aa19.19■□□□□ 0.66
SNX1-206ENST00000559389 GALNT8Q9NY28 637 aa19.19■□□□□ 0.66
SNX1-206ENST00000559389 PRSS50Q9UI38 385 aa19.19■□□□□ 0.66
SNX1-206ENST00000559389 UNC119BA6NIH7 251 aa19.18■□□□□ 0.66
SNX1-206ENST00000559389 NPIPB13A6NJU9 1138 aa19.18■□□□□ 0.66
SNX1-206ENST00000559389 NPIPB4C9JG80 1138 aa19.18■□□□□ 0.66
SNX1-206ENST00000559389 ZNF432O94892 652 aa19.18■□□□□ 0.66
SNX1-206ENST00000559389 F13BP05160 661 aa19.18■□□□□ 0.66
SNX1-206ENST00000559389 ZNF26P17031 533 aaPredicted RBP19.18■□□□□ 0.66
SNX1-206ENST00000559389 SELENOPP49908 381 aa19.18■□□□□ 0.66
SNX1-206ENST00000559389 TSPAN31Q12999 210 aa19.18■□□□□ 0.66
SNX1-206ENST00000559389 NIPAL3Q6P499 406 aa19.18■□□□□ 0.66
SNX1-206ENST00000559389 C10orf67Q8IYJ2 551 aa19.18■□□□□ 0.66
SNX1-206ENST00000559389 GIPC3Q8TF64 312 aa19.18■□□□□ 0.66
SNX1-206ENST00000559389 OR2M2Q96R28 347 aa19.18■□□□□ 0.66
SNX1-206ENST00000559389 TNFRSF13CQ96RJ3 184 aa19.18■□□□□ 0.66
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