RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 KLHL17Q6TDP4 642 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 CLEC18BQ6UXF7 455 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 THSD4Q6ZMP0 1018 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 CREB3L2Q70SY1 520 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 OAFQ86UD1 273 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 ATCAYQ86WG3 371 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 ZDHHC13Q8IUH4 622 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 CLEC18CQ8NCF0 446 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 OR13C2Q8NGS9 318 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 MOSPD2Q8NHP6 518 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 KLHL9Q9P2J3 617 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 KLHL13Q9P2N7 655 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 TEX15Q9BXT5 2789 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 TRAV27A0A087WT01 109 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 UNC119BA6NIH7 251 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 IL18BPO95998 194 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 CGAP01215 116 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 YES1P07947 543 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 HLA-DOBP13765 273 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 GSTM3P21266 225 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 AGTR1P30556 359 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 AQP2P41181 271 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 KIR2DL2P43627 348 aaPredicted RBP13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 ARHGDIAP52565 204 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 ADORA2A-AS1P86434 159 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 RASGEF1BQ0VAM2 473 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 FOXD4Q12950 439 aaPredicted RBP13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 PMS2P3Q13401 168 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 RFX4Q33E94 735 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 OGFRL1Q5TC84 451 aaPredicted RBP13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 TMEM211Q6ICI0 200 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 PPP4R4Q6NUP7 873 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 C3P1Q6ZMU1 363 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 CHMP1BQ7LBR1 199 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 FAM122BQ7Z309 247 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 NANOGNBQ7Z5D8 188 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 WDFY1Q8IWB7 410 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 OR9K2Q8NGE7 335 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 OR8D4Q8NGM9 314 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 SLC29A1Q99808 456 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 TACO1Q9BSH4 297 aaKnown RBP13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 PLA2G12AQ9BZM1 189 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 NRIP3Q9NQ35 241 aa13.16□□□□□ -0.3
SNRPA1-207ENST00000559309 TRGV8A0A0C4DH27 118 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 A0A0G2JNJ9 132 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 A0A1B0GUH1 482 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 WIPF3A6NGB9 483 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 PDLIM1O00151 329 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 DLGAP1O14490 977 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 SOCS2O14508 198 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 TXNDC12O95881 172 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 ADORA3P0DMS8 318 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 SAGP10523 405 aaPredicted RBP13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 APEHP13798 732 aaKnown RBP13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 ZNF23P17027 643 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 SLC34A1Q06495 639 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 FOXF2Q12947 444 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 ARMC4Q5T2S8 1044 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 GTF2IRD2BQ6EKJ0 949 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 RPL13AP3Q6NVV1 102 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 SMARCD3Q6STE5 483 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 FAM214BQ7L5A3 538 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 GTF2IRD2Q86UP8 949 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 STK32CQ86UX6 486 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 KDM8Q8N371 416 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 ANKK1Q8NFD2 765 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 ZNF385AQ96PM9 386 aaKnown RBP13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 CIB1Q99828 191 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 UCK2Q9BZX2 261 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 OR52D1Q9H346 318 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 SMURF2Q9HAU4 748 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 JKAMPQ9P055 326 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 Q9UFV3 132 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 RCE1Q9Y256 329 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 NOX1Q9Y5S8 564 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 CDH10Q9Y6N8 788 aa13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 INTS1Q8N201 2190 aaKnown RBP13.15□□□□□ -0.3
SNRPA1-207ENST00000559309 SAC3D1A6NKF1 404 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 MCIDASD6RGH6 385 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 BLOC1S5-TXNDC5H3BN57 136 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 BHLHE40O14503 412 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 GPR171O14626 319 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 ARPC3O15145 178 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 NDUFB2O95178 105 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 OSMP13725 252 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 POU2F1P14859 743 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 ALDH3A2P51648 485 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 PMPCAQ10713 525 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 DAG1Q14118 895 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 TAF11Q15544 211 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 HIST3H3Q16695 136 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 ALG10Q5BKT4 473 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 TMEM225Q6GV28 225 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 NCCRP1Q6ZVX7 275 aaPredicted RBP13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 TUSC5Q8IXB3 177 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 TMEM123Q8N131 208 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 CBR4Q8N4T8 237 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 C10orf53Q8N6V4 93 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 OR51A7Q8NH64 312 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 ZNF519Q8TB69 540 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms