RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 ZNF583Q96ND8 569 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 MOGAT1Q96PD6 335 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 ASPNQ9BXN1 380 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 CMTM6Q9NX76 183 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 RASD1Q9Y272 281 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 A0A087WUJ7 227 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 ZNF587BE7ETH6 402 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 M0R3G1 203 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 HS3ST1O14792 307 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 CCDC22O60826 627 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 ZNF682O95780 498 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 THY1P04216 161 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 CDKN1AP38936 164 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 CAPZA2P47755 286 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 PCYT1AP49585 367 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 NUDT2P50583 147 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 SLC7A2P52569 658 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 TAS2R41P59536 307 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 ADAM8P78325 824 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 SLC25A3Q00325 362 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 POU3F1Q03052 451 aaPredicted RBP10.54□□□□□ -0.72
TPM1-216ENST00000558910 SWI5Q1ZZU3 235 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 Q5PR19 223 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 TIMM23BQ5SRD1 257 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 FAM69AQ5T7M9 428 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 HMBOX1Q6NT76 420 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 TTC33Q6PID6 262 aaPredicted RBP10.54□□□□□ -0.72
TPM1-216ENST00000558910 SLC22A25Q6T423 547 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 KLHL24Q6TFL4 600 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 SPNS3Q6ZMD2 512 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 WDR88Q6ZMY6 472 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 H1FNTQ75WM6 255 aaPredicted RBP10.54□□□□□ -0.72
TPM1-216ENST00000558910 LINGO2Q7L985 606 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 TGIF2LYQ8IUE0 185 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 SLC30A8Q8IWU4 369 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 UEVLDQ8IX04 471 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 OR2T12Q8NG77 320 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 OR8J3Q8NGG0 315 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 ADAMTS16Q8TE57 1224 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 TMEM171Q8WVE6 324 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 SLC41A3Q96GZ6 507 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 TXNDC15Q96J42 360 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 ALPK1Q96QP1 1244 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 EPYCQ99645 322 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 SF3B5Q9BWJ5 86 aaKnown RBP10.54□□□□□ -0.72
TPM1-216ENST00000558910 GSX1Q9H4S2 264 aaPredicted RBP10.54□□□□□ -0.72
TPM1-216ENST00000558910 MED29Q9NX70 200 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 MALT1Q9UDY8 824 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 GMEB1Q9Y692 573 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 ATP23Q9Y6H3 246 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 USF3Q68DE3 2245 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 ACANP16112 2415 aa10.54□□□□□ -0.72
TPM1-216ENST00000558910 ELOVL7A1L3X0 281 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 ATP8B1O43520 1251 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 OR2T1O43869 369 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 VAMP5O95183 116 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 OR6A2O95222 327 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 BGLAPP02818 100 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 ADORA3P0DMS8 318 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 NCK1P16333 377 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 DRD4P21917 467 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 MPGP29372 298 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 CRYBA2P53672 197 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 ROR2Q01974 943 aaKnown RBP10.53□□□□□ -0.72
TPM1-216ENST00000558910 LIPEQ05469 1076 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 CAMK2DQ13557 499 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 C11orf91Q3C1V1 193 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 CYBRD1Q53TN4 286 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 FAM91A1Q658Y4 838 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 C20orf204Q6ZNR8 217 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 CALHM3Q86XJ0 350 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 MEX3DQ86XN8 651 aaKnown RBP10.53□□□□□ -0.72
TPM1-216ENST00000558910 MICU2Q8IYU8 434 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 GPR137CQ8N3F9 429 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 LRRC17Q8N6Y2 441 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 RNF148Q8N7C7 305 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 WDR31Q8NA23 367 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 LILRB1Q8NHL6 650 aaPredicted RBP10.53□□□□□ -0.72
TPM1-216ENST00000558910 PFN4Q8NHR9 129 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 RP9Q8TA86 221 aaKnown RBP10.53□□□□□ -0.72
TPM1-216ENST00000558910 HTRA1Q92743 480 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 PIGTQ969N2 578 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 SLC35B4Q969S0 331 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 FBXW5Q969U6 566 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 TMEM45BQ96B21 275 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 Q96MF0 132 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 OXGR1Q96P68 337 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 SMR3AQ99954 134 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 NSRP1Q9H0G5 558 aaKnown RBP10.53□□□□□ -0.72
TPM1-216ENST00000558910 OR10A4Q9H209 315 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 BEX4Q9NWD9 120 aaPredicted RBP10.53□□□□□ -0.72
TPM1-216ENST00000558910 RHCGQ9UBD6 479 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 SLC25A15Q9Y619 301 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 CADP27708 2225 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 MED13LQ71F56 2210 aa10.53□□□□□ -0.72
TPM1-216ENST00000558910 MTORP42345 2549 aa10.52□□□□□ -0.72
TPM1-216ENST00000558910 DSCAMO60469 2012 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 TRAPPC13A5PLN9 417 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 FAM220BPB1ANY3 271 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 MS4A18H0YCH9 400 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms