RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 TNFSF12O43508 249 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 HMGN2P05204 90 aaKnown RBP10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 FPR3P25089 353 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 ELAVL4P26378 380 aaKnown RBP10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 CLDN12P56749 244 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 PLCXD2Q0VAA5 305 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 PDE7AQ13946 482 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 GRM7Q14831 915 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 ALKBH2Q6NS38 261 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 MBOAT2Q6ZWT7 520 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 S100A7AQ86SG5 101 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 TMEM130Q8N3G9 435 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 GALNT16Q8N428 558 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 GATSQ8NAP1 163 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 MTMR14Q8NCE2 650 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 SLC39A7Q92504 469 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 TMEM106AQ96A25 262 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 FAM3DQ96BQ1 224 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 TMEM231Q9H6L2 316 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 PTBP3O95758 552 aaKnown RBP10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 CST2P09228 141 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 MYH6P13533 1939 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 CCNOP22674 350 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 TM4SF1P30408 202 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 HIST1H3AP68431 136 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 PITX1P78337 314 aaPredicted RBP10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 TMEM71Q6P5X7 295 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 SLC16A13Q7RTY0 426 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 SLC38A6Q8IZM9 456 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 PRSS35Q8N3Z0 413 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 BRI3BPQ8WY22 251 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 HINT2Q9BX68 163 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 TMEM59Q9BXS4 323 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 PARD6AQ9NPB6 346 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 TM7SF3Q9NS93 570 aa10.94□□□□□ -0.66
CSPG4P12-201ENST00000558282 FTCDNL1E5RQL4 147 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 FABP4P15090 132 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 OMGP23515 440 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 PCBP4P57723 403 aaKnown RBP10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 DGCR2P98153 550 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 TMEM183BQ1AE95 376 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 SLC22A6Q4U2R8 563 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 ZNF485Q8NCK3 441 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 SH3RF2Q8TEC5 729 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 FAM71F1Q96KD3 344 aaPredicted RBP10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 ELOVL3Q9HB03 270 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 MIOXQ9UGB7 285 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 YTHDF2Q9Y5A9 579 aaKnown RBP10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 ZNF727A8MUV8 499 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 FAM171A2A8MVW0 826 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 ZNF728P0DKX0 622 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 AADACP22760 399 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 SP2Q02086 613 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 PJVKQ0ZLH3 352 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 OGFOD3Q6PK18 319 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 RNF111Q6ZNA4 994 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 DAZLQ92904 295 aaKnown RBP10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 TSLPQ969D9 159 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 AK3Q9UIJ7 227 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 ZFP92A6NM28 416 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 NUDT21O43809 227 aaKnown RBP10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 CASRP41180 1078 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 EEF1A1P68104 462 aaKnown RBP10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 EEF1A2Q05639 463 aaKnown RBP10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 HABP2Q14520 560 aaPredicted RBP10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 EEF1A1P5Q5VTE0 462 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 ANKRD16Q6P6B7 361 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 FJX1Q86VR8 437 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 BPIFCQ8NFQ6 507 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 TMEM174Q8WUU8 243 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 DDIT4LQ96D03 193 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 C11orf49Q9H6J7 331 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 RNF167Q9H6Y7 350 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 RGPD8O14715 1765 aaPredicted RBP10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 TMEM269A0A1B0GVZ9 245 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 NME2P1O60361 137 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 GLAP06280 429 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 SELPP16109 830 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 ADRA2CP18825 462 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 SUOXP51687 545 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 DEFB134Q4QY38 66 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 USP51Q70EK9 711 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 GCNT2Q8N0V5 402 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 LMAN1LQ9HAT1 526 aa10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 USP36Q9P275 1121 aaKnown RBP10.93□□□□□ -0.66
CSPG4P12-201ENST00000558282 M0QYG6 137 aa10.92□□□□□ -0.66
CSPG4P12-201ENST00000558282 GALTP07902 379 aa10.92□□□□□ -0.66
CSPG4P12-201ENST00000558282 SFTA3P0C7M3 94 aa10.92□□□□□ -0.66
CSPG4P12-201ENST00000558282 TBPP20226 339 aa10.92□□□□□ -0.66
CSPG4P12-201ENST00000558282 ACKR3P25106 362 aa10.92□□□□□ -0.66
CSPG4P12-201ENST00000558282 CDK5Q00535 292 aa10.92□□□□□ -0.66
CSPG4P12-201ENST00000558282 TPBGQ13641 420 aa10.92□□□□□ -0.66
CSPG4P12-201ENST00000558282 SLC35D3Q5M8T2 416 aa10.92□□□□□ -0.66
CSPG4P12-201ENST00000558282 SFRP5Q5T4F7 317 aa10.92□□□□□ -0.66
CSPG4P12-201ENST00000558282 GGNBP1Q5YKI7 109 aa10.92□□□□□ -0.66
CSPG4P12-201ENST00000558282 SERINC5Q86VE9 423 aa10.92□□□□□ -0.66
CSPG4P12-201ENST00000558282 SLC22A24Q8N4F4 322 aa10.92□□□□□ -0.66
CSPG4P12-201ENST00000558282 OR51A4Q8NGJ6 313 aa10.92□□□□□ -0.66
CSPG4P12-201ENST00000558282 OR8U1Q8NH10 309 aa10.92□□□□□ -0.66
CSPG4P12-201ENST00000558282 USB1Q9BQ65 265 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms