RNA–Protein interactions for RNA: ENST00000557764.5

TRAPPC6B-207, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 2

Gene TRAPPC6B, Length 870 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-207ENST00000557764 DEFB112Q30KQ8 113 aa12.11□□□□□ -0.47
TRAPPC6B-207ENST00000557764 SPDYE7PQ495Y7 208 aa12.11□□□□□ -0.47
TRAPPC6B-207ENST00000557764 PRAMEF8Q5VWM4 474 aa12.11□□□□□ -0.47
TRAPPC6B-207ENST00000557764 PRAMEF7Q5VXH5 474 aa12.11□□□□□ -0.47
TRAPPC6B-207ENST00000557764 CMIPQ8IY22 773 aa12.11□□□□□ -0.47
TRAPPC6B-207ENST00000557764 OR56A1Q8NGH5 318 aa12.11□□□□□ -0.47
TRAPPC6B-207ENST00000557764 LINC01006Q8NI28 216 aa12.11□□□□□ -0.47
TRAPPC6B-207ENST00000557764 SNX33Q8WV41 574 aa12.11□□□□□ -0.47
TRAPPC6B-207ENST00000557764 DCAKDQ8WVC6 231 aa12.11□□□□□ -0.47
TRAPPC6B-207ENST00000557764 CCL17Q92583 94 aa12.11□□□□□ -0.47
TRAPPC6B-207ENST00000557764 TSPAN32Q96QS1 320 aa12.11□□□□□ -0.47
TRAPPC6B-207ENST00000557764 MARCH7Q9H992 704 aa12.11□□□□□ -0.47
TRAPPC6B-207ENST00000557764 MID1IP1Q9NPA3 183 aa12.11□□□□□ -0.47
TRAPPC6B-207ENST00000557764 SLC6A13Q9NSD5 602 aa12.11□□□□□ -0.47
TRAPPC6B-207ENST00000557764 BAIAP2L1Q9UHR4 511 aa12.11□□□□□ -0.47
TRAPPC6B-207ENST00000557764 NOTCH3Q9UM47 2321 aa12.11□□□□□ -0.47
TRAPPC6B-207ENST00000557764 DOCK11Q5JSL3 2073 aa12.1□□□□□ -0.47
TRAPPC6B-207ENST00000557764 SACSQ9NZJ4 4579 aa12.1□□□□□ -0.47
TRAPPC6B-207ENST00000557764 AP3D1O14617 1153 aa12.1□□□□□ -0.47
TRAPPC6B-207ENST00000557764 SCN2BO60939 215 aa12.1□□□□□ -0.47
TRAPPC6B-207ENST00000557764 TAC1P20366 129 aa12.1□□□□□ -0.47
TRAPPC6B-207ENST00000557764 IMPDH1P20839 514 aa12.1□□□□□ -0.47
TRAPPC6B-207ENST00000557764 TACR3P29371 465 aa12.1□□□□□ -0.47
TRAPPC6B-207ENST00000557764 P2RY4P51582 365 aa12.1□□□□□ -0.47
TRAPPC6B-207ENST00000557764 SELENOVP59797 346 aa12.1□□□□□ -0.47
TRAPPC6B-207ENST00000557764 ARFGAP2Q8N6H7 521 aa12.1□□□□□ -0.47
TRAPPC6B-207ENST00000557764 BHLHE22Q8NFJ8 381 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC6B-207ENST00000557764 ZNF75AQ96N20 296 aa12.1□□□□□ -0.47
TRAPPC6B-207ENST00000557764 SAP30LQ9HAJ7 183 aa12.1□□□□□ -0.47
TRAPPC6B-207ENST00000557764 RRAGDQ9NQL2 400 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC6B-207ENST00000557764 ADPRHL2Q9NX46 363 aa12.1□□□□□ -0.47
TRAPPC6B-207ENST00000557764 POLR3KQ9Y2Y1 108 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC6B-207ENST00000557764 GOLGA6L6A8MZA4 724 aa12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 PIP5K1CO60331 668 aa12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 VAMP5O95183 116 aa12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 PLATP00750 562 aa12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 CHRM4P08173 479 aa12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 SDC1P18827 310 aa12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 MAKP20794 623 aa12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 RPS26P62854 115 aaKnown RBP12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 FAM205BPQ63HN1 556 aa12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 RGS7BPQ6MZT1 257 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 CCBE1Q6UXH8 406 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 VASH1Q7L8A9 365 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 GPR137CQ8N3F9 429 aa12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 ELMOD3Q96FG2 381 aa12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 CCT7Q99832 543 aa12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 PRDM13Q9H4Q3 707 aa12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 AURKAIP1Q9NWT8 199 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 SLC7A8Q9UHI5 535 aa12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 CCL27Q9Y4X3 112 aa12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 TANC2Q9HCD6 1990 aa12.09□□□□□ -0.47
TRAPPC6B-207ENST00000557764 ZNF99A8MXY4 864 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 SLC43A1O75387 559 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 OPN1MWP04001 364 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 OPN1MW2P0DN77 364 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 OPN1MW3P0DN78 364 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 CD80P33681 288 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 PTDSS1P48651 473 aaKnown RBP12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 MAP2K6P52564 334 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 CLDN17P56750 224 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 KLF3P57682 345 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 SEC61A1P61619 476 aaKnown RBP12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 PLAURQ03405 335 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 PAX8Q06710 450 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 ARHGAP11BQ3KRB8 267 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 R3HCC1LQ7Z5L2 792 aaKnown RBP12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 HMGN2P46Q86SG4 172 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 LRRC8AQ8IWT6 810 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 KDM8Q8N371 416 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 OR5AK3PQ8NH89 298 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 SYNPRQ8TBG9 265 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 PPP1R14AQ96A00 147 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 MTERF3Q96E29 417 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 METTL2AQ96IZ6 378 aaKnown RBP12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 WWC2-AS2Q96NR7 200 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 ERP44Q9BS26 406 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 TAPBPLQ9BX59 468 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 ZNF350Q9GZX5 532 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 EXOSC3Q9NQT5 275 aaKnown RBP12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 NECAP2Q9NVZ3 263 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 C1orf109Q9NX04 203 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 SLCO1C1Q9NYB5 712 aa12.08□□□□□ -0.48
TRAPPC6B-207ENST00000557764 TRAV40A0A0B4J280 105 aa12.07□□□□□ -0.48
TRAPPC6B-207ENST00000557764 SLC22A23A1A5C7 686 aa12.07□□□□□ -0.48
TRAPPC6B-207ENST00000557764 CLDN24A6NM45 220 aa12.07□□□□□ -0.48
TRAPPC6B-207ENST00000557764 AK1P00568 194 aa12.07□□□□□ -0.48
TRAPPC6B-207ENST00000557764 MYZAPP0CAP1 466 aa12.07□□□□□ -0.48
TRAPPC6B-207ENST00000557764 PRPH2P23942 346 aa12.07□□□□□ -0.48
TRAPPC6B-207ENST00000557764 LSP1P33241 339 aa12.07□□□□□ -0.48
TRAPPC6B-207ENST00000557764 SLC6A9P48067 706 aa12.07□□□□□ -0.48
TRAPPC6B-207ENST00000557764 PLTPP55058 493 aa12.07□□□□□ -0.48
TRAPPC6B-207ENST00000557764 PRR20EP86478 221 aa12.07□□□□□ -0.48
TRAPPC6B-207ENST00000557764 PRR20CP86479 221 aa12.07□□□□□ -0.48
TRAPPC6B-207ENST00000557764 PRR20DP86480 221 aa12.07□□□□□ -0.48
TRAPPC6B-207ENST00000557764 PRR20BP86481 221 aa12.07□□□□□ -0.48
TRAPPC6B-207ENST00000557764 PRR20AP86496 221 aa12.07□□□□□ -0.48
TRAPPC6B-207ENST00000557764 FAM153CQ494X1 144 aa12.07□□□□□ -0.48
TRAPPC6B-207ENST00000557764 AP1ARQ63HQ0 302 aa12.07□□□□□ -0.48
TRAPPC6B-207ENST00000557764 BRD3OSQ6XYD6 125 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms