RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 FLVCR1Q9Y5Y0 555 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 RP1L1Q8IWN7 2480 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-227ENST00000557269 ARRDC5A6NEK1 342 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 HSPB2A8KAH6 182 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 ZNF724A8MTY0 619 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 G3V2T6 193 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 PDLIM1O00151 329 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 TRAF3IP2O43734 574 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-227ENST00000557269 SERPINI2O75830 405 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 BAG2O95816 211 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 CGAP01215 116 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 TP53P04637 393 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-227ENST00000557269 IFNGR2P38484 337 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 SLC9A3P48764 834 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 DAPP51397 102 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 IL1RL1Q01638 556 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 TSPAN31Q12999 210 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 GK3PQ14409 553 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 RCN1Q15293 331 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 POU4F3Q15319 338 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 HSPB2Q16082 182 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 GTF2IRD2BQ6EKJ0 949 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 THSD4Q6ZMP0 1018 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 PXKQ7Z7A4 578 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 GTF2IRD2Q86UP8 949 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 LINC00471Q8N535 108 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 ICA1LQ8NDH6 482 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 SDCCAG3Q96C92 435 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 NRBF2Q96F24 287 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 DGCR6LQ9BY27 220 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 EGLN3Q9H6Z9 239 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 C12orf49Q9H741 205 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 SMURF2Q9HAU4 748 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 FANCFQ9NPI8 374 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 GLRX2Q9NS18 164 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 IL20RAQ9UHF4 553 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 MGAT4BQ9UQ53 548 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 MYO7BQ6PIF6 2116 aa11.38□□□□□ -0.59
SHMT2-227ENST00000557269 MCIDASD6RGH6 385 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 RNF13O43567 381 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 VAMP5O95183 116 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 OR6A2O95222 327 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 CRHP06850 196 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 ANPEPP15144 967 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 IFNGR1P15260 489 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 ZNF23P17027 643 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 BMP5P22003 454 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 CLDN17P56750 224 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 POU3F1Q03052 451 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-227ENST00000557269 LGALS3BPQ08380 585 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 C1DQ13901 141 aaKnown RBP11.37□□□□□ -0.59
SHMT2-227ENST00000557269 ALG10Q5BKT4 473 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 TMEM201Q5SNT2 666 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 EEF1A1P5Q5VTE0 462 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 FAHD1Q6P587 224 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 KLHL17Q6TDP4 642 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 STK32CQ86UX6 486 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 UEVLDQ8IX04 471 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 RELL2Q8NC24 303 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-227ENST00000557269 ITLN2Q8WWU7 325 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-227ENST00000557269 ZFP3Q96NJ6 502 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 EMC6Q9BV81 110 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 PLA2G12AQ9BZM1 189 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 UCK2Q9BZX2 261 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 GP6Q9HCN6 339 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 KRCC1Q9NPI7 259 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-227ENST00000557269 MED29Q9NX70 200 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 REV1Q9UBZ9 1251 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 NKX1-2Q9UD57 310 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-227ENST00000557269 NOX1Q9Y5S8 564 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 HIVEP3Q5T1R4 2406 aa11.37□□□□□ -0.59
SHMT2-227ENST00000557269 UBR5O95071 2799 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-227ENST00000557269 NCOA6Q14686 2063 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-227ENST00000557269 CLEC18AA5D8T8 446 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 WIPF3A6NGB9 483 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 MITFO75030 526 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-227ENST00000557269 SOX14O95416 240 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 ADAP00813 363 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 ZNF43P17038 809 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 SELENOPP49908 381 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 ARHGDIAP52565 204 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 MELKQ14680 651 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 MTFR2Q6P444 385 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 CLEC18BQ6UXF7 455 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 CD300LDQ6UXZ3 194 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 ZNF620Q6ZNG0 422 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 SLC35D2Q76EJ3 337 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 GALNT5Q7Z7M9 940 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 MRGPRGQ86SM5 289 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 HIPK1Q86Z02 1210 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 ZDHHC13Q8IUH4 622 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 SVOPLQ8N434 492 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 ZNF610Q8N9Z0 462 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 ATG16L2Q8NAA4 619 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 CLEC18CQ8NCF0 446 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 ANKK1Q8NFD2 765 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 OR8D4Q8NGM9 314 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 TMEM45BQ96B21 275 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 SAMD8Q96LT4 415 aa11.36□□□□□ -0.59
SHMT2-227ENST00000557269 CIB1Q99828 191 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms