RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 H0YC42 278 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 XRCC3O43542 346 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 OR1F1O43749 312 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 RDH16O75452 317 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 RBBP9O75884 186 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 SNAPINO95295 136 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 PMS2P2O95744 297 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 MRPL3P09001 348 aaKnown RBP11.51□□□□□ -0.57
APEX1-216ENST00000557159 CDK2P24941 298 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 NOS3P29474 1203 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 MTSS1LQ765P7 747 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 CCDC116Q8IYX3 515 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 OR2L13Q8N349 312 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 OR5AR1Q8NGP9 310 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 OR14A16Q8NHC5 309 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 CCDC107Q8WV48 283 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 TFGQ92734 400 aaPredicted RBP11.51□□□□□ -0.57
APEX1-216ENST00000557159 BPIFA2Q96DR5 249 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 SLC35A4Q96G79 324 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 NARS2Q96I59 477 aaKnown RBP11.51□□□□□ -0.57
APEX1-216ENST00000557159 MS4A4EQ96PG1 132 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 RPP25Q9BUL9 199 aaKnown RBP11.51□□□□□ -0.57
APEX1-216ENST00000557159 AICDAQ9GZX7 198 aa11.51□□□□□ -0.57
APEX1-216ENST00000557159 FEZF1A0PJY2 475 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 TMEM218A2RU14 115 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 PRRT4C9JH25 899 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 GOSR2O14653 212 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 FCMRO60667 390 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 ERAL1O75616 437 aaKnown RBP11.5□□□□□ -0.57
APEX1-216ENST00000557159 SPDEFO95238 335 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 SIX6O95475 246 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 IGF2P01344 180 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 SLC6A6P31641 620 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 CSF2RBP32927 897 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 SLC16A1P53985 500 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 DUSP2Q05923 314 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 STX4Q12846 297 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 AGERQ15109 404 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 C2orf68Q2NKX9 166 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 AMZ1Q400G9 498 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 TP53I3Q53FA7 332 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 PAN3Q58A45 887 aaKnown RBP11.5□□□□□ -0.57
APEX1-216ENST00000557159 SLC35D3Q5M8T2 416 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 HES5Q5TA89 166 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 MFSD12Q6NUT3 480 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 ZNF613Q6PF04 617 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 VITQ6UXI7 678 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 WDR88Q6ZMY6 472 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 ERN2Q76MJ5 926 aaKnown RBP11.5□□□□□ -0.57
APEX1-216ENST00000557159 C12orf40Q86WS4 652 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 DND1Q8IYX4 353 aaKnown RBP11.5□□□□□ -0.57
APEX1-216ENST00000557159 MUC20Q8N307 709 aaPredicted RBP11.5□□□□□ -0.57
APEX1-216ENST00000557159 OR4D10Q8NGI6 311 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 NXPE3Q969Y0 559 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 PRAP1Q96NZ9 151 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 PLA2G2FQ9BZM2 168 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 ESRP2Q9H6T0 727 aaKnown RBP11.5□□□□□ -0.57
APEX1-216ENST00000557159 APMAPQ9HDC9 416 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 PRDM7Q9NQW5 492 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 MED31Q9Y3C7 131 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 WDR45Q9Y484 360 aa11.5□□□□□ -0.57
APEX1-216ENST00000557159 TRAV14DV4A0A0A6YYC5 116 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 TMEM272A0A1B0GTI8 110 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 BCL2L11O43521 198 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 LCMT2O60294 686 aaKnown RBP11.49□□□□□ -0.57
APEX1-216ENST00000557159 AIFM1O95831 613 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 DBIP07108 87 aaKnown RBP11.49□□□□□ -0.57
APEX1-216ENST00000557159 NAT2P11245 290 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 C6P13671 934 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 EDNRAP25101 427 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 MC3RP41968 323 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 RBM34P42696 430 aaKnown RBP11.49□□□□□ -0.57
APEX1-216ENST00000557159 STARP49675 285 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 GPR143P51810 404 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 NR0B1P51843 470 aaKnown RBP11.49□□□□□ -0.57
APEX1-216ENST00000557159 ZP2Q05996 745 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 ZNF234Q14588 700 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 TOMM20Q15388 145 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 OR1Q1Q15612 314 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 EXOSC6Q5RKV6 272 aaKnown RBP11.49□□□□□ -0.57
APEX1-216ENST00000557159 SLC6A19Q695T7 634 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 JMJD6Q6NYC1 403 aaPredicted RBP11.49□□□□□ -0.57
APEX1-216ENST00000557159 ABHD17CQ6PCB6 329 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 SKA3Q8IX90 412 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 SLC35F2Q8IXU6 374 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 SLC35F3Q8IY50 421 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 SAMD14Q8IZD0 417 aaPredicted RBP11.49□□□□□ -0.57
APEX1-216ENST00000557159 ACOT4Q8N9L9 421 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 OR52B4Q8NGK2 314 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 OR4C16Q8NGL9 310 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 OR8K3Q8NH51 312 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 TNFAIP8L1Q8WVP5 186 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 ARRDC3Q96B67 414 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 MS4A6EQ96DS6 147 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 KXD1Q9BQD3 176 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 FAM117AQ9C073 453 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 ZNF350Q9GZX5 532 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 SLITRK2Q9H156 845 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 FANCFQ9NPI8 374 aa11.49□□□□□ -0.57
APEX1-216ENST00000557159 PRDM9Q9NQV7 894 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms