RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ARMCX4Q5H9R4 360 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 ALG10BQ5I7T1 473 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 C3orf38Q5JPI3 329 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 TOR2AQ5JU69 321 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 WBP2NLQ6ICG8 309 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 PWWP2BQ6NUJ5 590 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 SMARCD3Q6STE5 483 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 NPSR1Q6W5P4 371 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 HSDL2Q6YN16 418 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 GDPGP1Q6ZNW5 385 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 ZNF367Q7RTV3 350 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 NUP54Q7Z3B4 507 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 OAFQ86UD1 273 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 P2RY8Q86VZ1 359 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 PPP1R3BQ86XI6 285 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 SLC34A3Q8N130 599 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 CADM2Q8N3J6 435 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 ZNF614Q8N883 585 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 ZBTB44Q8NCP5 570 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 OR52L1Q8NGH7 329 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 OR5L2Q8NGL0 311 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 OR9Q1Q8NGQ5 310 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 OR1N1Q8NGS0 311 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 OR2I1PQ8NGU4 316 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 IFI44Q8TCB0 444 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 STT3BQ8TCJ2 826 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 ZNF721Q8TF20 911 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 ADIPOR1Q96A54 375 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 LGALS12Q96DT0 336 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 RAX2Q96IS3 184 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 SAMD8Q96LT4 415 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 ZNF48Q96MX3 618 aaPredicted RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 ZNF582Q96NG8 517 aaPredicted RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 PRSS27Q9BQR3 290 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 NUDT9Q9BW91 350 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 MND1Q9BWT6 205 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 GTPBP2Q9BX10 602 aaKnown RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 NDEL1Q9GZM8 345 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 VN1R1Q9GZP7 353 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 LAT2Q9GZY6 243 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 SLC26A1Q9H2B4 701 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 UBQLN3Q9H347 655 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 EGLN3Q9H6Z9 239 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 SIAEQ9HAT2 523 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 C12orf10Q9HB07 376 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 PLGRKTQ9HBL7 147 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 FGF20Q9NP95 211 aaPredicted RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 FBXO8Q9NRD0 319 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 TBC1D23Q9NUY8 699 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 TMEM140Q9NV12 185 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 CNIH4Q9P003 139 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 AKAP7Q9P0M2 348 aaPredicted RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 C19orf25Q9UFG5 118 aaPredicted RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 ENPP5Q9UJA9 477 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 ZNF223Q9UK11 482 aaPredicted RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 NXT1Q9UKK6 140 aaKnown RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 ICAM5Q9UMF0 924 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 PPIEQ9UNP9 301 aaKnown RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 DIMT1Q9UNQ2 313 aaKnown RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 NTNG1Q9Y2I2 539 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 PCDHGB6Q9Y5F9 930 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 PCDHGA5Q9Y5G8 931 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 U3KQA8 63 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 C2orf16Q68DN1 1984 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 DOCK8Q8NF50 2099 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 CKAP5Q14008 2032 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 GCN1Q92616 2671 aaKnown RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 A0A087WUJ7 227 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 NPIPA5A0A0B4J1W7 369 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 A0A1W2PPW3 197 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 A0A1W2PQD3 144 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 VSTM2BA6NLU5 285 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 RIIAD1A6NNX1 92 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 KDM4EB2RXH2 506 aaPredicted RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 IDSB3KWA1 339 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 NPIPA7E9PJI5 369 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 NTN3O00634 580 aaPredicted RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 SURF4O15260 269 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 MPPED1O15442 326 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 ZNF264O43296 627 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 AIREO43918 545 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 ALOX12BO75342 701 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 CLPXO76031 633 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 ZFAND5O76080 213 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 GABARAPO95166 117 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 RAB36O95755 333 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 IFNGP01579 166 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 HIST1H2ABP04908 130 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 LCKP06239 509 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 IGKV2-30P06310 120 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 SP9P0CG40 484 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 NPIPA8P0DM63 369 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 SAGP10523 405 aaPredicted RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 DBTP11182 482 aaKnown RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 PPP3CBP16298 524 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 FUT1P19526 365 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 PAICSP22234 425 aaKnown RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 MPGP29372 298 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 IL12BP29460 328 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms