RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 TSPAN17Q96FV3 270 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 CERS2Q96G23 380 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 FRG2BQ96QU4 278 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 KLHDC3Q9BQ90 382 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 EGLN1Q9GZT9 426 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 MMP28Q9H239 520 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 NUDT4Q9NZJ9 180 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 FZR1Q9UM11 496 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 SLC12A4Q9UP95 1085 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 TRAPPC4Q9Y296 219 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 WNK2Q9Y3S1 2297 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 KIR2DS1A0A191URI9 304 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 ANKRD28O15084 1053 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 RAD51CO43502 376 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 KCNK2O95069 426 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 NKX2-2O95096 273 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 PSMG1O95456 288 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 IGHV4-59P01825 116 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 IFI6P09912 130 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 PRPS2P11908 318 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 ZNF35P13682 527 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 CD1DP15813 335 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 ATP6V1C1P21283 382 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 IVDP26440 423 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 ARL1P40616 181 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-245ENST00000556958 APOBEC1P41238 236 aaKnown RBP4.79□□□□□ -1.64
ATXN3-245ENST00000556958 ETV4P43268 484 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 MAGEA3P43357 314 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 CAPZA2P47755 286 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 KLF3P57682 345 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-245ENST00000556958 KRTAP10-11P60412 298 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 SLC35A1P78382 337 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 H3F3AP84243 136 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 EGFEM1PQ0D2K5 195 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 GALNT1Q10472 559 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-245ENST00000556958 ZNF460Q14592 562 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 OR4D1Q15615 310 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 ALKBH6Q3KRA9 238 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 KLHL26Q53HC5 615 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 SLC35E4Q6ICL7 350 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 RGS7BPQ6MZT1 257 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-245ENST00000556958 CBLN3Q6UW01 205 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 TMEM107Q6UX40 140 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 RAPH1Q70E73 1250 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 MDP1Q86V88 176 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 ZC3HC1Q86WB0 502 aaKnown RBP4.79□□□□□ -1.64
ATXN3-245ENST00000556958 NDUFA11Q86Y39 141 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 CCDC170Q8IYT3 715 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 CDRT4Q8N9R6 151 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 PAPD5Q8NDF8 572 aaKnown RBP4.79□□□□□ -1.64
ATXN3-245ENST00000556958 RFWD2Q8NHY2 731 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 SYNPRQ8TBG9 265 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 MAIP1Q8WWC4 291 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 C11orf40Q8WZ69 217 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 ST8SIA1Q92185 356 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 EXT2Q93063 718 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 ELP4Q96EB1 424 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 NEURL3Q96EH8 262 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 PLEKHA8Q96JA3 519 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 C3orf30Q96M34 536 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 SF3B5Q9BWJ5 86 aaKnown RBP4.79□□□□□ -1.64
ATXN3-245ENST00000556958 ACTRT3Q9BYD9 372 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 QRSL1Q9H0R6 528 aaKnown RBP4.79□□□□□ -1.64
ATXN3-245ENST00000556958 TOR3AQ9H497 397 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 ELOVL6Q9H5J4 265 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 IPPKQ9H8X2 491 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 ACOXLQ9NUZ1 547 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 TMEM181Q9P2C4 612 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 MYEF2Q9P2K5 600 aaKnown RBP4.79□□□□□ -1.64
ATXN3-245ENST00000556958 SLC7A8Q9UHI5 535 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 PACSIN2Q9UNF0 486 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-245ENST00000556958 TFR2Q9UP52 801 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 LRCH1Q9Y2L9 728 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 RNF11Q9Y3C5 154 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 NPTNQ9Y639 398 aa4.79□□□□□ -1.64
ATXN3-245ENST00000556958 DNAH3Q8TD57 4116 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 IGHV2-70DA0A0C4DH43 119 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 SYCE1LA8MT33 242 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 SUPT3HB4E1H0 165 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 P2RY10O00398 339 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 SUPT3HO75486 399 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 IPO7O95373 1038 aaKnown RBP4.78□□□□□ -1.64
ATXN3-245ENST00000556958 JUNP05412 331 aaKnown RBP4.78□□□□□ -1.64
ATXN3-245ENST00000556958 IL3P08700 152 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 BCKDHAP12694 445 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 FAHP16930 419 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 DRD4P21917 467 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 NTSP30990 170 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 CCR4P51679 360 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 SESN3P58005 492 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 GNB2P62879 340 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 SUMO1P63165 101 aaKnown RBP4.78□□□□□ -1.64
ATXN3-245ENST00000556958 ARF1P84077 181 aaKnown RBP4.78□□□□□ -1.64
ATXN3-245ENST00000556958 TSTQ16762 297 aaKnown RBP4.78□□□□□ -1.64
ATXN3-245ENST00000556958 RNASEH2BQ5TBB1 312 aaKnown RBP4.78□□□□□ -1.64
ATXN3-245ENST00000556958 METTL2BQ6P1Q9 378 aaKnown RBP4.78□□□□□ -1.64
ATXN3-245ENST00000556958 CYP2R1Q6VVX0 501 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 MYPOPQ86VE0 399 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-245ENST00000556958 LRRC28Q86X40 367 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-245ENST00000556958 PTOV1Q86YD1 416 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms