RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 CARM1Q86X55 608 aa12.77□□□□□ -0.37
CHD8-211ENST00000556833 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.77□□□□□ -0.37
CHD8-211ENST00000556833 ZNF540Q8NDQ6 660 aa12.77□□□□□ -0.37
CHD8-211ENST00000556833 NUP37Q8NFH4 326 aa12.77□□□□□ -0.37
CHD8-211ENST00000556833 MFSD8Q8NHS3 518 aa12.77□□□□□ -0.37
CHD8-211ENST00000556833 UBASH3BQ8TF42 649 aa12.77□□□□□ -0.37
CHD8-211ENST00000556833 TAAR8Q969N4 342 aa12.77□□□□□ -0.37
CHD8-211ENST00000556833 DOK1Q99704 481 aa12.77□□□□□ -0.37
CHD8-211ENST00000556833 SYT3Q9BQG1 590 aa12.77□□□□□ -0.37
CHD8-211ENST00000556833 SPATA9Q9BWV2 254 aa12.77□□□□□ -0.37
CHD8-211ENST00000556833 LINC00470Q9BZP3 86 aa12.77□□□□□ -0.37
CHD8-211ENST00000556833 OCEL1Q9H607 264 aa12.77□□□□□ -0.37
CHD8-211ENST00000556833 CALML5Q9NZT1 146 aa12.77□□□□□ -0.37
CHD8-211ENST00000556833 ZNF232Q9UNY5 417 aa12.77□□□□□ -0.37
CHD8-211ENST00000556833 SLC22A3O75751 556 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 ZNF432O94892 652 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 HLA-DOBP13765 273 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 CBR1P16152 277 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 HTR2AP28223 471 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 GRPRP30550 384 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 THBS2P35442 1172 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 ALDH3B1P43353 468 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 SH3BGRP55822 239 aaPredicted RBP12.76□□□□□ -0.37
CHD8-211ENST00000556833 TXNL4AP83876 142 aaKnown RBP12.76□□□□□ -0.37
CHD8-211ENST00000556833 MAD2L1BPQ15013 274 aaPredicted RBP12.76□□□□□ -0.37
CHD8-211ENST00000556833 ZSWIM7Q19AV6 140 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 ALKBH6Q3KRA9 238 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 THSD4Q6ZMP0 1018 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 WDFY1Q8IWB7 410 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 LINC01356Q8N9X3 169 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 MAGEE2Q8TD90 523 aaPredicted RBP12.76□□□□□ -0.37
CHD8-211ENST00000556833 STK35Q8TDR2 534 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 BOD1Q96IK1 185 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 OXGR1Q96P68 337 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 OR2M2Q96R28 347 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 TMEM109Q9BVC6 243 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 MRPL37Q9BZE1 423 aaKnown RBP12.76□□□□□ -0.37
CHD8-211ENST00000556833 PIF1Q9H611 641 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 ZNF442Q9H7R0 627 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 DYSFO75923 2080 aa12.76□□□□□ -0.37
CHD8-211ENST00000556833 TMEM247A6NEH6 219 aa12.75□□□□□ -0.37
CHD8-211ENST00000556833 AIM2O14862 343 aa12.75□□□□□ -0.37
CHD8-211ENST00000556833 HDAC3O15379 428 aa12.75□□□□□ -0.37
CHD8-211ENST00000556833 HPRP00739 348 aa12.75□□□□□ -0.37
CHD8-211ENST00000556833 TACSTD2P09758 323 aa12.75□□□□□ -0.37
CHD8-211ENST00000556833 NQO1P15559 274 aaKnown RBP12.75□□□□□ -0.37
CHD8-211ENST00000556833 GIFP27352 417 aa12.75□□□□□ -0.37
CHD8-211ENST00000556833 CDH15P55291 814 aa12.75□□□□□ -0.37
CHD8-211ENST00000556833 PDCD4Q53EL6 469 aaKnown RBP12.75□□□□□ -0.37
CHD8-211ENST00000556833 SLC2A7Q6PXP3 512 aa12.75□□□□□ -0.37
CHD8-211ENST00000556833 LRP11Q86VZ4 500 aa12.75□□□□□ -0.37
CHD8-211ENST00000556833 ZNF786Q8N393 782 aa12.75□□□□□ -0.37
CHD8-211ENST00000556833 NEU4Q8WWR8 484 aaPredicted RBP12.75□□□□□ -0.37
CHD8-211ENST00000556833 ITCHQ96J02 903 aa12.75□□□□□ -0.37
CHD8-211ENST00000556833 ANKRD27Q96NW4 1050 aa12.75□□□□□ -0.37
CHD8-211ENST00000556833 RSPO3Q9BXY4 272 aaPredicted RBP12.75□□□□□ -0.37
CHD8-211ENST00000556833 MED29Q9NX70 200 aa12.75□□□□□ -0.37
CHD8-211ENST00000556833 RCE1Q9Y256 329 aa12.75□□□□□ -0.37
CHD8-211ENST00000556833 CMAHPQ9Y471 501 aa12.75□□□□□ -0.37
CHD8-211ENST00000556833 IGKV1D-42A0A075B6H8 117 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 A0A096LPI6 279 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 A0A0G2JPF8 293 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 A0A1B0GWA3 101 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 TRPC5OSA6NMA1 111 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 HNRNPCL2B2RXH8 293 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 HNRNPCL3B7ZW38 293 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 C5orf58C9J3I9 102 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 LRRN3E7EW58 273 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 WNT9BO14905 357 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 TRAF3IP2O43734 574 aaPredicted RBP12.74□□□□□ -0.37
CHD8-211ENST00000556833 HNRNPCL1O60812 293 aaKnown RBP12.74□□□□□ -0.37
CHD8-211ENST00000556833 IL6P05231 212 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 HNRNPCL4P0DMR1 293 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 B4GALT1P15291 398 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 PTDSS1P48651 473 aaKnown RBP12.74□□□□□ -0.37
CHD8-211ENST00000556833 POLR2JP52435 117 aaKnown RBP12.74□□□□□ -0.37
CHD8-211ENST00000556833 SEC24CP53992 1094 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 WDR4P57081 412 aaKnown RBP12.74□□□□□ -0.37
CHD8-211ENST00000556833 POU3F1Q03052 451 aaPredicted RBP12.74□□□□□ -0.37
CHD8-211ENST00000556833 LRRC74AQ0VAA2 488 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 CAMK2DQ13557 499 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 RIN1Q13671 783 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 C3orf36Q3SXR2 165 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 GLIPR1L2Q4G1C9 344 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 C1QTNF12Q5T7M4 302 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 ZNF813Q6ZN06 617 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 MAVSQ7Z434 540 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 TMEM123Q8N131 208 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 RFLNBQ8N5W9 214 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 C10orf53Q8N6V4 93 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 GLB1L3Q8NCI6 653 aaPredicted RBP12.74□□□□□ -0.37
CHD8-211ENST00000556833 NFKBIDQ8NI38 313 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 TXNDC15Q96J42 360 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 OR52B2Q96RD2 323 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 OR51B6Q9H340 312 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 ARMC7Q9H6L4 198 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 METTL17Q9H7H0 456 aaPredicted RBP12.74□□□□□ -0.37
CHD8-211ENST00000556833 RMND5AQ9H871 391 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 SSU72Q9NP77 194 aaKnown RBP12.74□□□□□ -0.37
CHD8-211ENST00000556833 MYEF2Q9P2K5 600 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms