RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 MUS81Q96NY9 551 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 CDRT15Q96T59 188 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 NGBQ9NPG2 151 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 MEPEQ9NQ76 525 aaPredicted RBP13.36□□□□□ -0.27
ACTN1-217ENST00000556203 CCM2LQ9NUG4 571 aaPredicted RBP13.36□□□□□ -0.27
ACTN1-217ENST00000556203 NDE1Q9NXR1 346 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 RPS6KA6Q9UK32 745 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 A4GNTQ9UNA3 340 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 SNX13Q9Y5W8 968 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 FREM1Q5H8C1 2179 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 A0A1W2PR80 420 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 ZNF587BE7ETH6 402 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 C11orf98E9PRG8 122 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 J3KTA2 159 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 AKAP8O43823 692 aaKnown RBP13.35□□□□□ -0.27
ACTN1-217ENST00000556203 SLC43A1O75387 559 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 SERPINI2O75830 405 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 ATE1O95260 518 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 MT-ND1P03886 318 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 RAF1P04049 648 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 ADORA3P0DMS8 318 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 UMPSP11172 480 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 HSD17B1P14061 328 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 MNAT1P51948 309 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 TGFBR3Q03167 851 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 KEAP1Q14145 624 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 ZNF704Q6ZNC4 412 aaPredicted RBP13.35□□□□□ -0.27
ACTN1-217ENST00000556203 LINGO2Q7L985 606 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 SSX8Q7RTT4 187 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 SLC46A3Q7Z3Q1 461 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 PXKQ7Z7A4 578 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 DEFB107AQ8IZN7 70 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 LRRC17Q8N6Y2 441 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 C1orf162Q8NEQ5 155 aaPredicted RBP13.35□□□□□ -0.27
ACTN1-217ENST00000556203 NSL1Q96IY1 281 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 HS6ST2Q96MM7 605 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 OR2M2Q96R28 347 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 FNDC11Q9BVV2 318 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 LINC00470Q9BZP3 86 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 UBTD1Q9HAC8 227 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 C20orf141Q9NUB4 165 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 MED29Q9NX70 200 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 RHCGQ9UBD6 479 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 ZNF229Q9UJW7 825 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 MED31Q9Y3C7 131 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 NOX1Q9Y5S8 564 aa13.35□□□□□ -0.27
ACTN1-217ENST00000556203 OR7A10O76100 309 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 PLAUP00749 431 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 HIST1H2ABP04908 130 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 ASAH2BP0C7U1 165 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 FUT4P22083 530 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 MSX2P35548 267 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-217ENST00000556203 ROR2Q01974 943 aaKnown RBP13.34□□□□□ -0.27
ACTN1-217ENST00000556203 FXNQ16595 210 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 NCMAPQ5T1S8 102 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 CARD17Q5XLA6 110 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 HMBOX1Q6NT76 420 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 HIST3H2AQ7L7L0 130 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 OFCC1Q8IZS5 231 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 C17orf78Q8N4C9 275 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 WDR31Q8NA23 367 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 HIST1H2ACQ93077 130 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 SGTBQ96EQ0 304 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 TXNDC15Q96J42 360 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 TMEM204Q9BSN7 226 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 EMC6Q9BV81 110 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 ESRP2Q9H6T0 727 aaKnown RBP13.34□□□□□ -0.27
ACTN1-217ENST00000556203 DCAF13Q9NV06 445 aaKnown RBP13.34□□□□□ -0.27
ACTN1-217ENST00000556203 TAS2R5Q9NYW4 299 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 NPAP1Q9NZP6 1156 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 CD300AQ9UGN4 299 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 MAGEL2Q9UJ55 1249 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 SAMD4AQ9UPU9 718 aaKnown RBP13.34□□□□□ -0.27
ACTN1-217ENST00000556203 SLC25A15Q9Y619 301 aa13.34□□□□□ -0.27
ACTN1-217ENST00000556203 DPRXA6NFQ7 191 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 B2RBV5 119 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 FFAR1O14842 300 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 CLOCKO15516 846 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 RNF13O43567 381 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 PIP5K1CO60331 668 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 CD3EP07766 207 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 HOXC12P31275 282 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 ART1P52961 327 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 BSPH1Q075Z2 132 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 ZP4Q12836 540 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 ACKR1Q16570 336 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 NHLRC1Q6VVB1 395 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 NANOGNBQ7Z5D8 188 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 TMEM123Q8N131 208 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 GPR137CQ8N3F9 429 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 PIK3C3Q8NEB9 887 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 ANKK1Q8NFD2 765 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 OR1K1Q8NGR3 316 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 GORASP2Q9H8Y8 452 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 SLC17A5Q9NRA2 495 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 MAN2C1Q9NTJ4 1040 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 RNF115Q9Y4L5 304 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 ENPP4Q9Y6X5 453 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 V9GYQ6 96 aa13.33□□□□□ -0.28
ACTN1-217ENST00000556203 POLQO75417 2590 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms