RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ZBTB9Q96C00 473 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SLC25A36Q96CQ1 311 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 MS4A3Q96HJ5 214 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 MAELQ96JY0 434 aaKnown RBP12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 OXGR1Q96P68 337 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ZNF587Q96SQ5 575 aaPredicted RBP12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 KCNS3Q9BQ31 491 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 MRPL37Q9BZE1 423 aaKnown RBP12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 CRLF2Q9HC73 371 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 A0A0G2JPF8 293 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 LOC102725191A0A1B0GVB3 256 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SH3PXD2BA1X283 911 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 HNRNPCL2B2RXH8 293 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 HNRNPCL3B7ZW38 293 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 MS4A18H0YCH9 400 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 HAX1O00165 279 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 TCF21O43680 179 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 HNRNPCL1O60812 293 aaKnown RBP12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 VENTXO95231 258 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 AHSA1O95433 338 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ADRA2AP08913 450 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 HNRNPCL4P0DMR1 293 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 BMP2P12643 396 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ZNF35P13682 527 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 HLA-DOBP13765 273 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ZNF14P17017 642 aaPredicted RBP12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 NR4A1P22736 598 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 CRATP43155 626 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ANXA11P50995 505 aaKnown RBP12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 CHN2P52757 468 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 COPZ1P61923 177 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 LRRC74AQ0VAA2 488 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 MS4A18Q3C1V0 323 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 PDCD4Q53EL6 469 aaKnown RBP12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 WDR93Q6P2C0 686 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ZNF627Q7L945 461 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 LRP11Q86VZ4 500 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 GLB1L3Q8NCI6 653 aaPredicted RBP12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SEMA6DQ8NFY4 1073 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 CKAP2Q8WWK9 683 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 MAL2Q969L2 176 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 WFDC6Q9BQY6 131 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 PAIP1Q9H074 479 aaKnown RBP12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 TPK1Q9H3S4 243 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 BCL2L10Q9HD36 194 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 CALML5Q9NZT1 146 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 MYEF2Q9P2K5 600 aaKnown RBP12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 TRRAPQ9Y4A5 3859 aa12.36□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ZNF99A8MXY4 864 aaPredicted RBP12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 HDAC3O15379 428 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 TPST2O60704 377 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SLC43A1O75387 559 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 HLA-HP01893 362 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 HPXP02790 462 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ZNF43P17038 809 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 NCF2P19878 526 aaPredicted RBP12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 COL8A2P25067 703 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 GRPRP30550 384 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ARR3P36575 388 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 DVL1P1P54792 670 aaPredicted RBP12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 NPRL3Q12980 569 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SNTB2Q13425 540 aaKnown RBP12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 CCNIQ14094 377 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 DAG1Q14118 895 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 LARS2Q15031 903 aaKnown RBP12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 GLIPR1L2Q4G1C9 344 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SLC9B1Q4ZJI4 515 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 LIPNQ5VXI9 398 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 KRT80Q6KB66 452 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 DEF8Q6ZN54 512 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 MSRB3Q8IXL7 192 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 C20orf196Q8IYI0 205 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 GTF2H4Q92759 462 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SLC35B4Q969S0 331 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 MRPL24Q96A35 216 aaKnown RBP12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SLC41A3Q96GZ6 507 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ANKRD27Q96NW4 1050 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 MOV10Q9HCE1 1003 aaKnown RBP12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SDR39U1Q9NRG7 319 aaPredicted RBP12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 PCDHB14Q9Y5E9 798 aa12.35□□□□□ -0.43
CHMP4BP1-201ENST00000556017 WNK2Q9Y3S1 2297 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 A0A1B0GWA3 101 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 FAM157AC9JC47 383 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 RGS16O15492 202 aaPredicted RBP12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 TPST1O60507 370 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SLC22A3O75751 556 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 NCR1O76036 304 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 IL6P05231 212 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 IFNGR1P15260 489 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SEC24CP53992 1094 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 RGNQ15493 299 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 FXNQ16595 210 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ZNF311Q5JNZ3 666 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 FAM69AQ5T7M9 428 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 C1orf229Q6ZS94 237 aaPredicted RBP12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ZNF584Q8IVC4 421 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 KIRREL3Q8IZU9 778 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 LSMEM1Q8N8F7 131 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 CLDND2Q8NHS1 167 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 YIPF5Q969M3 257 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms