RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 REEP3Q6NUK4 255 aa9.4□□□□□ -0.9
TDP1-212ENST00000555565 DHRS4L2Q6PKH6 230 aa9.4□□□□□ -0.9
TDP1-212ENST00000555565 LRRC8CQ8TDW0 803 aa9.4□□□□□ -0.9
TDP1-212ENST00000555565 TAAR8Q969N4 342 aa9.4□□□□□ -0.9
TDP1-212ENST00000555565 SLC38A2Q96QD8 506 aa9.4□□□□□ -0.9
TDP1-212ENST00000555565 CCDC28BQ9BUN5 200 aa9.4□□□□□ -0.9
TDP1-212ENST00000555565 LINC00470Q9BZP3 86 aa9.4□□□□□ -0.9
TDP1-212ENST00000555565 NELFAQ9H3P2 528 aa9.4□□□□□ -0.9
TDP1-212ENST00000555565 C12orf10Q9HB07 376 aa9.4□□□□□ -0.9
TDP1-212ENST00000555565 B3GAT1Q9P2W7 334 aa9.4□□□□□ -0.9
TDP1-212ENST00000555565 RPS6KB2Q9UBS0 482 aa9.4□□□□□ -0.9
TDP1-212ENST00000555565 RCE1Q9Y256 329 aa9.4□□□□□ -0.9
TDP1-212ENST00000555565 ARPC4-TTLL3A0A0A6YYG9 625 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 IGHV4-61A0A0C4DH41 118 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 RPL36A-HNRNPH2H7BZ11 118 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 M0R082 166 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 OR2T1O43869 369 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 ZNF432O94892 652 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 VENTXO95231 258 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 ZNF43P17038 809 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 GPX2P18283 190 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 PPIBP23284 216 aaKnown RBP9.39□□□□□ -0.91
TDP1-212ENST00000555565 GTF2E2P29084 291 aaKnown RBP9.39□□□□□ -0.91
TDP1-212ENST00000555565 EFNA4P52798 201 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 CLDN17P56750 224 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 TUBA1BP68363 451 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 TUBA4AP68366 448 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 ROR2Q01974 943 aaKnown RBP9.39□□□□□ -0.91
TDP1-212ENST00000555565 ADRM1Q16186 407 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 AGKQ53H12 422 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 TTMPQ5BVD1 217 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 FAM69AQ5T7M9 428 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 ANKRD16Q6P6B7 361 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 TUBA1AQ71U36 451 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 KRT73Q86Y46 540 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 SGMS2Q8NHU3 365 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 ZNF417Q8TAU3 575 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 MAGEE2Q8TD90 523 aaPredicted RBP9.39□□□□□ -0.91
TDP1-212ENST00000555565 ZNF837Q96EG3 531 aaPredicted RBP9.39□□□□□ -0.91
TDP1-212ENST00000555565 ATP6V1G3Q96LB4 118 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 OXGR1Q96P68 337 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 ZNF317Q96PQ6 595 aaPredicted RBP9.39□□□□□ -0.91
TDP1-212ENST00000555565 ZNF587Q96SQ5 575 aaPredicted RBP9.39□□□□□ -0.91
TDP1-212ENST00000555565 WFDC6Q9BQY6 131 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 TMEM38AQ9H6F2 299 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 CRNNQ9UBG3 495 aaPredicted RBP9.39□□□□□ -0.91
TDP1-212ENST00000555565 PMF1-BGLAPU3KQ54 211 aa9.39□□□□□ -0.91
TDP1-212ENST00000555565 A0A096LPE4 126 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 A0A1W2PPZ6 126 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 AIM2O14862 343 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 TPST2O60704 377 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 TGFAP01135 160 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 IGLV1-44P01699 117 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 CRYAAP02489 173 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 CECR9P0C854 216 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 BMP4P12644 408 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 CBLP22681 906 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 GRPRP30550 384 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 NR4A2P43354 598 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 ATP4BP51164 291 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 SH3BGRP55822 239 aaPredicted RBP9.38□□□□□ -0.91
TDP1-212ENST00000555565 UBE2NP61088 152 aaKnown RBP9.38□□□□□ -0.91
TDP1-212ENST00000555565 ARF1P84077 181 aaKnown RBP9.38□□□□□ -0.91
TDP1-212ENST00000555565 NAAAQ02083 359 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 C1DQ13901 141 aaKnown RBP9.38□□□□□ -0.91
TDP1-212ENST00000555565 SCARB2Q14108 478 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 GGTLC2Q14390 218 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 C3orf36Q3SXR2 165 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 PDLIM3Q53GG5 364 aaPredicted RBP9.38□□□□□ -0.91
TDP1-212ENST00000555565 ALG10BQ5I7T1 473 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 ULK3Q6PHR2 472 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 C5orf46Q6UWT4 87 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 DLEU7Q6UYE1 221 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 H1FNTQ75WM6 255 aaPredicted RBP9.38□□□□□ -0.91
TDP1-212ENST00000555565 ANKK1Q8NFD2 765 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 SEMA6DQ8NFY4 1073 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 DNAJA4Q8WW22 397 aaPredicted RBP9.38□□□□□ -0.91
TDP1-212ENST00000555565 SLC38A4Q969I6 547 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 FBXO17Q96EF6 278 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 KATNB1Q9BVA0 655 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 SPATA5L1Q9BVQ7 753 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 SEC61A2Q9H9S3 476 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 GPR35Q9HC97 309 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 CA10Q9NS85 328 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 KLHL14Q9P2G3 628 aa9.38□□□□□ -0.91
TDP1-212ENST00000555565 TESQ9UGI8 421 aaKnown RBP9.38□□□□□ -0.91
TDP1-212ENST00000555565 PRKDCP78527 4128 aaKnown RBP9.37□□□□□ -0.91
TDP1-212ENST00000555565 TRAV36DV7A0A075B6V5 113 aa9.37□□□□□ -0.91
TDP1-212ENST00000555565 A0A087WUJ7 227 aa9.37□□□□□ -0.91
TDP1-212ENST00000555565 A0A0B4J2E0 115 aa9.37□□□□□ -0.91
TDP1-212ENST00000555565 LOC102725191A0A1B0GVB3 256 aa9.37□□□□□ -0.91
TDP1-212ENST00000555565 A0A1B0GX12 115 aa9.37□□□□□ -0.91
TDP1-212ENST00000555565 ZNF503-AS2A6NEH8 195 aa9.37□□□□□ -0.91
TDP1-212ENST00000555565 PRORSD1PA6NEY8 169 aa9.37□□□□□ -0.91
TDP1-212ENST00000555565 EVPLLA8MZ36 301 aa9.37□□□□□ -0.91
TDP1-212ENST00000555565 MS4A18H0YCH9 400 aa9.37□□□□□ -0.91
TDP1-212ENST00000555565 TRAF3IP2O43734 574 aaPredicted RBP9.37□□□□□ -0.91
TDP1-212ENST00000555565 SLC43A1O75387 559 aa9.37□□□□□ -0.91
TDP1-212ENST00000555565 MFN2O95140 757 aa9.37□□□□□ -0.91
TDP1-212ENST00000555565 HPRP00739 348 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms