RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 RNF128Q8TEB7 428 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 CA5BP1Q8WTZ4 195 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 GMPPAQ96IJ6 420 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-218ENST00000555213 FAM46AQ96IP4 442 aaKnown RBP9.75□□□□□ -0.85
SHMT2-218ENST00000555213 ARL5BQ96KC2 179 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 HS6ST2Q96MM7 605 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 NAA11Q9BSU3 229 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-218ENST00000555213 SFXN3Q9BWM7 321 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 SRXN1Q9BYN0 137 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 RIBC2Q9H4K1 309 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 RNF122Q9H9V4 155 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 ZNF226Q9NYT6 803 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 EMC3Q9P0I2 261 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 KLHL9Q9P2J3 617 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 EMC9Q9Y3B6 208 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 FREM3P0C091 2139 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 MED12Q93074 2177 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 UBR5O95071 2799 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-218ENST00000555213 ZC3H12DA2A288 527 aaKnown RBP9.74□□□□□ -0.85
SHMT2-218ENST00000555213 LIPT2A6NK58 231 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 NPIPB7O75200 414 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 RCBTB2O95199 551 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 TGM6O95932 706 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 LYNP07948 512 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 FPR3P25089 353 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 CTSSP25774 331 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 CEACAM8P31997 349 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-218ENST00000555213 OPRM1P35372 400 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 GGT2P36268 569 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 RPS5P46782 204 aaKnown RBP9.74□□□□□ -0.85
SHMT2-218ENST00000555213 ESRRGP62508 458 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 ADORA2A-AS1P86434 159 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 CDK5Q00535 292 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 IL1RL1Q01638 556 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 CD47Q08722 323 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 ACSM5Q6NUN0 579 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 PAQR6Q6TCH4 344 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 RASSF6Q6ZTQ3 369 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 SEM1Q6ZVN7 128 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 NCCRP1Q6ZVX7 275 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-218ENST00000555213 GCNT2Q8N0V5 402 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 CNEP1R1Q8N9A8 125 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 OR8D4Q8NGM9 314 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 OR6S1Q8NH40 331 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 MFSD8Q8NHS3 518 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 INTS12Q96CB8 462 aaKnown RBP9.74□□□□□ -0.85
SHMT2-218ENST00000555213 LRRC46Q96FV0 321 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 ASPNQ9BXN1 380 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 PLA2G12AQ9BZM1 189 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 GP6Q9HCN6 339 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 KRCC1Q9NPI7 259 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-218ENST00000555213 IL20Q9NYY1 176 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 RNF6Q9Y252 685 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 MED31Q9Y3C7 131 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 CORINQ9Y5Q5 1042 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 HIVEP3Q5T1R4 2406 aa9.74□□□□□ -0.85
SHMT2-218ENST00000555213 GTF3C1Q12789 2109 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 A0A0G2JNJ9 132 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 CLEC18AA5D8T8 446 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 HTR3EA5X5Y0 456 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 KPNA4O00629 521 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-218ENST00000555213 SMAD9O15198 467 aaKnown RBP9.73□□□□□ -0.85
SHMT2-218ENST00000555213 WBP4O75554 376 aaKnown RBP9.73□□□□□ -0.85
SHMT2-218ENST00000555213 AQP8O94778 261 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 IL18BPO95998 194 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 MT-ATP6P00846 226 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 BMP5P22003 454 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 GPR4P46093 362 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 GIPRP48546 466 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 AGFG1P52594 562 aaKnown RBP9.73□□□□□ -0.85
SHMT2-218ENST00000555213 CDK5R2Q13319 367 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 IL18R1Q13478 541 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 SLC25A35Q3KQZ1 300 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 TMEM201Q5SNT2 666 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 SLX4IPQ5VYV7 408 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 ABLIM2Q6H8Q1 611 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 CLEC18BQ6UXF7 455 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 RRM2BQ7LG56 351 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 THAP5Q7Z6K1 395 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 CLEC18CQ8NCF0 446 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 ZNF555Q8NEP9 628 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 RHOXF1Q8NHV9 184 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 ABHD3Q8WU67 409 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 APH1BQ8WW43 257 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 LIPHQ8WWY8 451 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 ROBO4Q8WZ75 1007 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 SLC25A36Q96CQ1 311 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 BPIFA2Q96DR5 249 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 KTI12Q96EK9 354 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-218ENST00000555213 DNAJA3Q96EY1 480 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 PIGMQ9H3S5 423 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 Q9H521 79 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 EGLN3Q9H6Z9 239 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 KIF17Q9P2E2 1029 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 KLHL13Q9P2N7 655 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 ZNF629Q9UEG4 869 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-218ENST00000555213 Q9UFV3 132 aa9.73□□□□□ -0.85
SHMT2-218ENST00000555213 SPENQ96T58 3664 aaKnown RBP9.72□□□□□ -0.85
SHMT2-218ENST00000555213 LRRK2Q5S007 2527 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 IGHV3-15A0A0B4J1V0 119 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms