RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 KLHL1Q9NR64 748 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 ASB6Q9NWX5 421 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 FBXL2Q9UKC9 423 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 NPIPB13A6NJU9 1138 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 C12orf71A8MTZ7 269 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 PRR32B1ATL7 298 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 NPIPB4C9JG80 1138 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 ZNF670-ZNF695F2Z2N8 137 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 MS4A18H0YCH9 400 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 GYPBP06028 91 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 HSMCR30P0CW71 290 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 CXCR1P25024 350 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 FGF9P31371 208 aaPredicted RBP8.03□□□□□ -1.12
TDP1-210ENST00000554976 GABRA5P31644 462 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 OPRL1P41146 370 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 BMXP51813 675 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 EIF3IQ13347 325 aaKnown RBP8.03□□□□□ -1.12
TDP1-210ENST00000554976 MS4A18Q3C1V0 323 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 LIPKQ5VXJ0 399 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 OR9Q1Q8NGQ5 310 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 OR5J2Q8NH18 312 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 SUN5Q8TC36 379 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 PSMF1Q92530 271 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 DEFB126Q9BYW3 111 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 FAM117AQ9C073 453 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 SIAEQ9HAT2 523 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 ZNF160Q9HCG1 818 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 WDR70Q9NW82 654 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 VSX1Q9NZR4 365 aaPredicted RBP8.03□□□□□ -1.12
TDP1-210ENST00000554976 PISDQ9UG56 409 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 PADI1Q9ULC6 663 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 YARS2Q9Y2Z4 477 aaKnown RBP8.03□□□□□ -1.12
TDP1-210ENST00000554976 A0A1W2PQL4 384 aaPredicted RBP8.03□□□□□ -1.12
TDP1-210ENST00000554976 DCTN6O00399 190 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 RGS13O14921 159 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 SULT1C4O75897 302 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 IFNGP01579 166 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 MYL12AP19105 171 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 GALP22466 123 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 TCEA1P23193 301 aaKnown RBP8.03□□□□□ -1.12
TDP1-210ENST00000554976 GPR50Q13585 617 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 CDONQ4KMG0 1287 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 ZNF468Q5VIY5 522 aaPredicted RBP8.03□□□□□ -1.12
TDP1-210ENST00000554976 OR5M10Q6IEU7 315 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 ZBTB46Q86UZ6 589 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 KLHL36Q8N4N3 616 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 POMGNT2Q8NAT1 580 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 C1GALT1C1Q96EU7 318 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 MRGPRX4Q96LA9 322 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 PGLYRP3Q96LB9 341 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 CHCHD6Q9BRQ6 235 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 ALG8Q9BVK2 526 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 OR11A1Q9GZK7 315 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 TXNL4BQ9NX01 149 aaKnown RBP8.03□□□□□ -1.12
TDP1-210ENST00000554976 ST6GALNAC2Q9UJ37 374 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 ZNF346Q9UL40 294 aaKnown RBP8.03□□□□□ -1.12
TDP1-210ENST00000554976 COPS3Q9UNS2 423 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 CENPBD1B2RD01 187 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 GLCEO94923 617 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 F13BP05160 661 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 ITPKBP27987 946 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 FABP5Q01469 135 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 C19orf57Q0VDD7 668 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 HES3Q5TGS1 186 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 ACBD7Q8N6N7 88 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 MFSD8Q8NHS3 518 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 SMAP2Q8WU79 429 aaPredicted RBP8.02□□□□□ -1.13
TDP1-210ENST00000554976 TMEM234Q8WY98 164 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 ZHX1-C8orf76Q96EF9 292 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 ARL5BQ96KC2 179 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 MED18Q9BUE0 208 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 KLHL13Q9P2N7 655 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 FARSAQ9Y285 508 aaKnown RBP8.02□□□□□ -1.13
TDP1-210ENST00000554976 NSG1A0A0A6YYJ2 146 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 A0A1W2PNV4 684 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 E9PI62 339 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 BLOC1S5-TXNDC5H3BN57 136 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 M0R3G1 203 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 TRIM3O75382 744 aaPredicted RBP8.02□□□□□ -1.13
TDP1-210ENST00000554976 CCL3P10147 92 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 ETV6P41212 452 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 MAP2K6P52564 334 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 CTXN1P60606 82 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 C1DQ13901 141 aaKnown RBP8.02□□□□□ -1.13
TDP1-210ENST00000554976 DGUOKQ16854 277 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 TMEM91Q6ZNR0 172 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 RFPL4BQ6ZWI9 263 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 MAMDC2Q7Z304 686 aaPredicted RBP8.02□□□□□ -1.13
TDP1-210ENST00000554976 TIGD4Q8IY51 512 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 ADPRHL1Q8NDY3 354 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 POTEKPQ9BYX7 375 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 AKAP7Q9P0M2 348 aaPredicted RBP8.02□□□□□ -1.13
TDP1-210ENST00000554976 B3GNT3Q9Y2A9 372 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 SEC16AO15027 2179 aa8.02□□□□□ -1.13
TDP1-210ENST00000554976 LOC101059948A0A1B0GTJ6 334 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 TRDV1A0A1B0GX56 115 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 SHISA3A0PJX4 238 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 LIPT2A6NK58 231 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 SHISA8B8ZZ34 492 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 C21orf140B9A014 251 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms