RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 SEMA5BQ9P283 1151 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 NLKQ9UBE8 527 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 TNFRSF10DQ9UBN6 386 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 STUB1Q9UNE7 303 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 IGKV1D-42A0A075B6H8 117 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 A0A1B0GVC2 190 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 A6NIN4 97 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 ELOA3DA6NLF2 546 aaPredicted RBP10.65□□□□□ -0.71
SHMT2-212ENST00000554467 PRR23D1E9PI22 279 aaPredicted RBP10.65□□□□□ -0.71
SHMT2-212ENST00000554467 PRR23D2P0DMB1 279 aaPredicted RBP10.65□□□□□ -0.71
SHMT2-212ENST00000554467 HTR1FP30939 366 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 AGFG1P52594 562 aaKnown RBP10.65□□□□□ -0.71
SHMT2-212ENST00000554467 CTBP2P56545 445 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 ERVK-25P63136 954 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF117Q03924 483 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 ELOA3BQ3SY89 546 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 PRPF38BQ5VTL8 546 aaKnown RBP10.65□□□□□ -0.71
SHMT2-212ENST00000554467 C1QL3Q5VWW1 255 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 LYPD4Q6UWN0 246 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 KLBQ86Z14 1044 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 RFLNBQ8N5W9 214 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 FAM98AQ8NCA5 519 aaKnown RBP10.65□□□□□ -0.71
SHMT2-212ENST00000554467 ELOA3Q8NG57 546 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 MOSPD2Q8NHP6 518 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 PMM1Q92871 262 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 ZFP64Q9NPA5 681 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 MKKSQ9NPJ1 570 aaPredicted RBP10.65□□□□□ -0.71
SHMT2-212ENST00000554467 TXNL4BQ9NX01 149 aaKnown RBP10.65□□□□□ -0.71
SHMT2-212ENST00000554467 SUSD2Q9UGT4 822 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 TMEM5Q9Y2B1 443 aa10.65□□□□□ -0.71
SHMT2-212ENST00000554467 FAM86C2PA6NEL3 165 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 FRG2CA6NGY1 282 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF264O43296 627 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 CDC40O60508 579 aaKnown RBP eCLIP10.64□□□□□ -0.71
SHMT2-212ENST00000554467 HEXBP07686 556 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 HIST1H1CP16403 213 aaKnown RBP10.64□□□□□ -0.71
SHMT2-212ENST00000554467 CELP19835 753 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 CBX5P45973 191 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 INPP1P49441 399 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 PSMD4P55036 377 aaKnown RBP10.64□□□□□ -0.71
SHMT2-212ENST00000554467 RHBDD2Q6NTF9 364 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 SLC29A4Q7RTT9 530 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 GPALPP1Q8IXQ4 340 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 TMEM105Q8N8V8 129 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 OR1N1Q8NGS0 311 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 ENKURQ8TC29 256 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 SPRYD4Q8WW59 207 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-212ENST00000554467 ST8SIA2Q92186 375 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 AKAP1Q92667 903 aaKnown RBP eCLIP10.64□□□□□ -0.71
SHMT2-212ENST00000554467 RASD2Q96D21 266 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 ZMYND19Q96E35 227 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-212ENST00000554467 SGTBQ96EQ0 304 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 MS4A7Q9GZW8 240 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-212ENST00000554467 FGF20Q9NP95 211 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-212ENST00000554467 ING3Q9NXR8 418 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 SEC14L4Q9UDX3 406 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 PLEKHB1Q9UF11 243 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-212ENST00000554467 RARRES3Q9UL19 164 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 A0A087WUJ7 227 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 RIIAD1A6NNX1 92 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 EFCAB7A8K855 629 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 MPC2O95563 127 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 ARSBP15848 533 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 PAICSP22234 425 aaKnown RBP10.64□□□□□ -0.71
SHMT2-212ENST00000554467 APEX1P27695 318 aaKnown RBP10.64□□□□□ -0.71
SHMT2-212ENST00000554467 MLLT11Q13015 90 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-212ENST00000554467 FNDC7Q5VTL7 733 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 LINC00114Q6XXX2 140 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF782Q6ZMW2 699 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-212ENST00000554467 KMT5CQ86Y97 462 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 LINC00469Q8N7U9 141 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF527Q8NB42 609 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 ZNRF4Q8WWF5 429 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 B3GAT2Q9NPZ5 323 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 CMC2Q9NRP2 79 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 NDUFB11Q9NX14 153 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 CLEC4AQ9UMR7 237 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 SIGLEC14Q08ET2 396 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 GPR139Q6DWJ6 353 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 PLET1Q6UQ28 207 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 CFAP77Q6ZQR2 320 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 RTL4Q6ZR62 310 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 MEPCEQ7L2J0 689 aaKnown RBP10.64□□□□□ -0.71
SHMT2-212ENST00000554467 CLDN22Q8N7P3 220 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 DUSP18Q8NEJ0 188 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 ATP6V1C2Q8NEY4 427 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 OR14A16Q8NHC5 309 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 ATPIF1Q9UII2 106 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 SLC35A3Q9Y2D2 325 aa10.64□□□□□ -0.71
SHMT2-212ENST00000554467 CCDC163A0A0D9SF12 145 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 CD8B2A6NJW9 211 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 AKAP8O43823 692 aaKnown RBP10.63□□□□□ -0.71
SHMT2-212ENST00000554467 CFDP00746 253 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-212ENST00000554467 F13BP05160 661 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 CD8BP10966 210 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF28P17035 718 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 TACR3P29371 465 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 AQP2P41181 271 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 NAA10P41227 235 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-212ENST00000554467 CLDN6P56747 220 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms