RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 LSRQ86X29 649 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-211ENST00000554310 CALHM3Q86XJ0 350 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 LRTOMTQ8WZ04 291 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 POP5Q969H6 163 aaKnown RBP11.53□□□□□ -0.56
SHMT2-211ENST00000554310 KTI12Q96EK9 354 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-211ENST00000554310 SLC47A1Q96FL8 570 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 PLPPR2Q96GM1 343 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 NSMCE2Q96MF7 247 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 EPYCQ99645 322 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 ARHGDIGQ99819 225 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 PTDSS2Q9BVG9 487 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 Q9H521 79 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 TAS2R16Q9NYV7 291 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 RASD1Q9Y272 281 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 CADP27708 2225 aa11.52□□□□□ -0.56
SHMT2-211ENST00000554310 MED13LQ71F56 2210 aa11.52□□□□□ -0.56
SHMT2-211ENST00000554310 IGKV1D-42A0A075B6H8 117 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 TRAV36DV7A0A075B6V5 113 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 OR5H1A6NKK0 313 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 FAM220BPB1ANY3 271 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 M0R3H8 397 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 DENRO43583 198 aaKnown RBP11.52□□□□□ -0.57
SHMT2-211ENST00000554310 CD53P19397 219 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 CD247P20963 164 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 NTF4P34130 210 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 RPS5P46782 204 aaKnown RBP11.52□□□□□ -0.57
SHMT2-211ENST00000554310 MED21Q13503 144 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 VEZF1Q14119 521 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 MFSD13AQ14CX5 517 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 OR1Q1Q15612 314 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 DUSP7Q16829 419 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 TIMM23BQ5SRD1 257 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 TMEM225Q6GV28 225 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 GLYATQ6IB77 296 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 HMBOX1Q6NT76 420 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 ZNF613Q6PF04 617 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 SEZ6L2Q6UXD5 910 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 ZNF704Q6ZNC4 412 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-211ENST00000554310 PACRGLQ8N7B6 248 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 ZNF433Q8N7K0 673 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-211ENST00000554310 GPR32P1Q8NGA4 272 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 OR6S1Q8NH40 331 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 EME1Q96AY2 570 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 TAMM41Q96BW9 452 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 MUCL1Q96DR8 90 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 ZNF583Q96ND8 569 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 TMEM204Q9BSN7 226 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 ESRP2Q9H6T0 727 aaKnown RBP11.52□□□□□ -0.57
SHMT2-211ENST00000554310 GORASP2Q9H8Y8 452 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 UBTD1Q9HAC8 227 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 C8orf4Q9NR00 106 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 BEX4Q9NWD9 120 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-211ENST00000554310 ARID1AO14497 2285 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 PLCE1Q9P212 2302 aa11.52□□□□□ -0.57
SHMT2-211ENST00000554310 A0A087WUJ7 227 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 OR6C65A6NJZ3 312 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 PDLIM1O00151 329 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 TPST2O60704 377 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 GMNNO75496 209 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 TIPRLO75663 272 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 RAD51DO75771 328 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 NCK1P16333 377 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 ZNF26P17031 533 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-211ENST00000554310 FASP25445 335 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 FAPQ12884 760 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 PPA1Q15181 289 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 STK11Q15831 433 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 ACKR1Q16570 336 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 C1QTNF12Q5T7M4 302 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 OR7E24Q6IFN5 339 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 AAED1Q7RTV5 226 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 ABHD12BQ7Z5M8 362 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-211ENST00000554310 C17orf78Q8N4C9 275 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 POMGNT2Q8NAT1 580 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 ADPRHL1Q8NDY3 354 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 C1orf162Q8NEQ5 155 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-211ENST00000554310 OR2T12Q8NG77 320 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 OR6T1Q8NGN1 323 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 RNF217Q8TC41 542 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 PIGTQ969N2 578 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 SLC25A36Q96CQ1 311 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 MCHR1Q99705 422 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 CCL19Q99731 98 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 PIP5K1AQ99755 562 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 WFDC6Q9BQY6 131 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 TMEM43Q9BTV4 400 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 PRR14Q9BWN1 585 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 SLCO5A1Q9H2Y9 848 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 UPB1Q9UBR1 384 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 USP22Q9UPT9 525 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 AURKCQ9UQB9 309 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 B3GALT5Q9Y2C3 310 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 RNF115Q9Y4L5 304 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 CORINQ9Y5Q5 1042 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 DSCAMO60469 2012 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 ACANP16112 2415 aa11.51□□□□□ -0.57
SHMT2-211ENST00000554310 CIB4A0PJX0 185 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 M0R082 166 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 CHP2O43745 196 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 IFNA14P01570 189 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms