RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 COL4A2P08572 1712 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 PRUNE2Q8WUY3 3088 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 PMS2P1A4D2B8 440 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 TEX46H3BTG2 121 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 J3QRE1 110 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 CYR61O00622 381 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 SOCS6O14544 535 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 SGCEO43556 437 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 CREBL2O60519 120 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-207ENST00000553837 STX11O75558 287 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 GLAP06280 429 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 MGAT2Q10469 447 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 DUSP8Q13202 625 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 PGGHGQ32M88 737 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 SLC25A25Q6KCM7 469 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 TEX19Q8NA77 164 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 PFN4Q8NHR9 129 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 NR4A3Q92570 626 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 ZFYVE21Q9BQ24 234 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 ALG8Q9BVK2 526 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 ZNF350Q9GZX5 532 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 ARL6Q9H0F7 186 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 SLC25A32Q9H2D1 315 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 PRDM9Q9NQV7 894 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 CA10Q9NS85 328 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 C20orf141Q9NUB4 165 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 TAS2R5Q9NYW4 299 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 ZNF223Q9UK11 482 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-207ENST00000553837 FBXL3Q9UKT7 428 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 GXYLT2A0PJZ3 443 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 ZC3H12DA2A288 527 aaKnown RBP11.23□□□□□ -0.61
SHMT2-207ENST00000553837 RAB19A4D1S5 217 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 FAM183AA6NL82 134 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 SHISA7A6NL88 538 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 SNRPGP15A8MWD9 76 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 TNFRSF10CO14798 259 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 ARPC1BO15143 372 aaKnown RBP11.23□□□□□ -0.61
SHMT2-207ENST00000553837 ARPC5O15511 151 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 AQP8O94778 261 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 S100A9P06702 114 aaKnown RBP11.23□□□□□ -0.61
SHMT2-207ENST00000553837 GABRG2P18507 467 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 MAKP20794 623 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 SDHBP21912 280 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 RPS4Y1P22090 263 aaKnown RBP11.23□□□□□ -0.61
SHMT2-207ENST00000553837 PAICSP22234 425 aaKnown RBP11.23□□□□□ -0.61
SHMT2-207ENST00000553837 RAD52P43351 418 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 FAM76BQ5HYJ3 339 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 DCST2Q5T1A1 773 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 FAM27D1Q5T7N8 215 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 OR5M10Q6IEU7 315 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 FIGNL1Q6PIW4 674 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 ARL9Q6T311 187 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 PRSS45Q7RTY3 260 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 PXKQ7Z7A4 578 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 OR51G2Q8NGK0 314 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 BAHD1Q8TBE0 780 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-207ENST00000553837 DPH1Q9BZG8 443 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 NOX3Q9HBY0 568 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 HINT3Q9NQE9 182 aaKnown RBP11.23□□□□□ -0.61
SHMT2-207ENST00000553837 SLCO1B1Q9Y6L6 691 aa11.23□□□□□ -0.61
SHMT2-207ENST00000553837 TCRBV21S2A2A0A5A6 115 aa11.22□□□□□ -0.61
SHMT2-207ENST00000553837 PLPP2O43688 288 aa11.22□□□□□ -0.61
SHMT2-207ENST00000553837 LTBRP36941 435 aa11.22□□□□□ -0.61
SHMT2-207ENST00000553837 MRPL2Q5T653 305 aaKnown RBP11.22□□□□□ -0.61
SHMT2-207ENST00000553837 TMEM17Q86X19 198 aa11.22□□□□□ -0.61
SHMT2-207ENST00000553837 GJD3Q8N144 294 aa11.22□□□□□ -0.61
SHMT2-207ENST00000553837 SLC44A3Q8N4M1 653 aa11.22□□□□□ -0.61
SHMT2-207ENST00000553837 SIRT6Q8N6T7 355 aa11.22□□□□□ -0.61
SHMT2-207ENST00000553837 PXT1Q8NFP0 134 aa11.22□□□□□ -0.61
SHMT2-207ENST00000553837 DMRTA2Q96SC8 542 aa11.22□□□□□ -0.61
SHMT2-207ENST00000553837 OR51M1Q9H341 326 aa11.22□□□□□ -0.61
SHMT2-207ENST00000553837 MED20Q9H944 212 aa11.22□□□□□ -0.61
SHMT2-207ENST00000553837 PLEKHA1Q9HB21 404 aa11.22□□□□□ -0.61
SHMT2-207ENST00000553837 RCE1Q9Y256 329 aa11.22□□□□□ -0.61
SHMT2-207ENST00000553837 DAPL1A0PJW8 107 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 C10orf142B7Z368 130 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 GATBO75879 557 aaKnown RBP11.21□□□□□ -0.61
SHMT2-207ENST00000553837 MT-ND5P03915 603 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 ATP1B1P05026 303 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 IL5P05113 134 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 IGHV4-34P06331 123 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 SNRPBP14678 240 aaKnown RBP11.21□□□□□ -0.61
SHMT2-207ENST00000553837 NT5EP21589 574 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 TLX1P31314 330 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-207ENST00000553837 CD96P40200 585 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 MAP3K8P41279 467 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 TAS2R43P59537 309 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 UBE2IP63279 158 aaKnown RBP11.21□□□□□ -0.61
SHMT2-207ENST00000553837 SMAD2Q15796 467 aaKnown RBP11.21□□□□□ -0.61
SHMT2-207ENST00000553837 SGCAQ16586 387 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 PRICKLE4Q2TBC4 344 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 ABHD13Q7L211 337 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 CPOQ8IVL8 374 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 GID4Q8IVV7 300 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 CA13Q8N1Q1 262 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 ZNF619Q8N2I2 560 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 SLC37A2Q8TED4 501 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 PIGKQ92643 395 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 PNPLA2Q96AD5 504 aa11.21□□□□□ -0.61
SHMT2-207ENST00000553837 ANKRD9Q96BM1 317 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms