RNA–Protein interactions for RNA: ENST00000553710.1

KTN1-211, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-211ENST00000553710 DCAF13Q9NV06 445 aaKnown RBP0.24□□□□□ -2.37
KTN1-211ENST00000553710 SLC25A37Q9NYZ2 338 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 DEC1Q9P2X7 70 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 ASF1AQ9Y294 204 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 MDC1Q14676 2089 aaKnown RBP0.24□□□□□ -2.37
KTN1-211ENST00000553710 C2orf16Q68DN1 1984 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 KIAA2026Q5HYC2 2103 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 CD163L1Q9NR16 1453 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 OBSL1O75147 1896 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 RPGRIP1LQ68CZ1 1315 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 ADGRA3Q8IWK6 1321 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 HELTA6NFD8 242 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 C19orf84I3L1E1 186 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 K7EM74 188 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 SLC28A1O00337 649 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 ST8SIA3O43173 380 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 SH3BP5O60239 455 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 CDRT1O95170 752 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 ADRB2P07550 413 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 ZFYP08048 801 aaPredicted RBP0.23□□□□□ -2.37
KTN1-211ENST00000553710 COX6B1P14854 86 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 PSMC3P17980 439 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 STARD6P59095 220 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 KLRC3Q07444 240 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 CIRBPQ14011 172 aaKnown RBP0.23□□□□□ -2.37
KTN1-211ENST00000553710 HCP5Q6MZN7 132 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 CWC27Q6UX04 472 aaKnown RBP0.23□□□□□ -2.37
KTN1-211ENST00000553710 TCF24Q7RTU0 167 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 PRSS41Q7RTY9 318 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 BPIFB2Q8N4F0 458 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 C3orf56Q8N813 242 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 UXS1Q8NBZ7 420 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 OR9A4Q8NGU2 314 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 HTR3CQ8WXA8 447 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 ESR2Q92731 530 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 CLDN23Q96B33 292 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 OPTNQ96CV9 577 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 GPR137Q96N19 417 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 RNF157Q96PX1 679 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 INTS14Q96SY0 518 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 TMEM121Q9BTD3 319 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 RNF126Q9BV68 326 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 ACPTQ9BZG2 426 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 NAPBQ9H115 298 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 RABEP2Q9H5N1 569 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 FAM114A2Q9NRY5 505 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 TMEM161AQ9NX61 479 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 MBD2Q9UBB5 411 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 RPUSD1Q9UJJ7 312 aaKnown RBP0.23□□□□□ -2.37
KTN1-211ENST00000553710 KLHDC2Q9Y2U9 406 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 MAD1L1Q9Y6D9 718 aa0.23□□□□□ -2.37
KTN1-211ENST00000553710 PIKFYVEQ9Y2I7 2098 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 SCN3AQ9NY46 2000 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 TLCD2A6NGC4 264 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 UBE2CO00762 179 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 CHEK1O14757 476 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 SMR3BP02814 79 aaPredicted RBP0.22□□□□□ -2.37
KTN1-211ENST00000553710 C8orf89P0DMQ9 161 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 SFTPCP11686 197 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 FCARP24071 287 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 RFC4P35249 363 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 PRKCIP41743 596 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 EMDP50402 254 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 HERV-K104P63124 156 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 FLI1Q01543 452 aaPredicted RBP0.22□□□□□ -2.37
KTN1-211ENST00000553710 CNTN2Q02246 1040 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 ST3GAL3Q11203 375 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 BAMBIQ13145 260 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 KARSQ15046 597 aaKnown RBP0.22□□□□□ -2.37
KTN1-211ENST00000553710 CLPPQ16740 277 aaPredicted RBP0.22□□□□□ -2.37
KTN1-211ENST00000553710 EPC2Q52LR7 807 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 Q5VSD8 79 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 C1orf146Q5VVC0 180 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 SAXO2Q658L1 398 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 BHLHA15Q7RTS1 189 aaPredicted RBP0.22□□□□□ -2.37
KTN1-211ENST00000553710 RABEPKQ7Z6M1 372 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 GLRX5Q86SX6 157 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 NAA40Q86UY6 237 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 IFNEQ86WN2 208 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 TMEM126BQ8IUX1 230 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 GATSQ8NAP1 163 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 TRPV1Q8NER1 839 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 SPATA13Q96N96 652 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 NOX3Q9HBY0 568 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 ZCCHC17Q9NP64 241 aaKnown RBP0.22□□□□□ -2.37
KTN1-211ENST00000553710 ACOXLQ9NUZ1 547 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 CHCHD3Q9NX63 227 aaKnown RBP0.22□□□□□ -2.37
KTN1-211ENST00000553710 CTNNA3Q9UI47 895 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 PLLPQ9Y342 182 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 LCTP09848 1927 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 BAZ2AQ9UIF9 1905 aaKnown RBP0.22□□□□□ -2.37
KTN1-211ENST00000553710 RGPD2P0DJD1 1756 aa0.22□□□□□ -2.37
KTN1-211ENST00000553710 KDRP35968 1356 aa0.21□□□□□ -2.38
KTN1-211ENST00000553710 KANK1Q14678 1352 aa0.21□□□□□ -2.38
KTN1-211ENST00000553710 RTL9Q8NET4 1388 aa0.21□□□□□ -2.38
KTN1-211ENST00000553710 TONSLQ96HA7 1378 aa0.21□□□□□ -2.38
KTN1-211ENST00000553710 PTPRDP23468 1912 aa0.21□□□□□ -2.38
KTN1-211ENST00000553710 KIF16BQ96L93 1317 aa0.21□□□□□ -2.38
KTN1-211ENST00000553710 ESYT2A0FGR8 921 aa0.21□□□□□ -2.38
KTN1-211ENST00000553710 CLRN2A0PK11 232 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms