RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 NCF2P19878 526 aaPredicted RBP6.62□□□□□ -1.35
NEK3-201ENST00000550331 HNF1AP20823 631 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 CRATP43155 626 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 SELENOPP49908 381 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 DSTNP60981 165 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 NAAAQ02083 359 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 BNIP2Q12982 314 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 MPP2Q14168 576 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 GGTLC2Q14390 218 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 LARS2Q15031 903 aaKnown RBP6.62□□□□□ -1.35
NEK3-201ENST00000550331 ADIPOQQ15848 244 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 PDCD4Q53EL6 469 aaKnown RBP6.62□□□□□ -1.35
NEK3-201ENST00000550331 NIPAL3Q6P499 406 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 MSANTD1Q6ZTZ1 278 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 LINGO2Q7L985 606 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 CROCCP2Q86T23 111 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 EPHX4Q8IUS5 362 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 NUP37Q8NFH4 326 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 OR4F15Q8NGB8 312 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 MFSD8Q8NHS3 518 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 SLC38A5Q8WUX1 472 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 BCL2L2Q92843 193 aaPredicted RBP6.62□□□□□ -1.35
NEK3-201ENST00000550331 SLC35B4Q969S0 331 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 C3orf49Q96BT1 292 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 MSI2Q96DH6 328 aaKnown RBP6.62□□□□□ -1.35
NEK3-201ENST00000550331 SPATA9Q9BWV2 254 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 NELFAQ9H3P2 528 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 PLK3Q9H4B4 646 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 WDR55Q9H6Y2 383 aaPredicted RBP6.62□□□□□ -1.35
NEK3-201ENST00000550331 ZNF442Q9H7R0 627 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 RMND5AQ9H871 391 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 SLC6A13Q9NSD5 602 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 THAP1Q9NVV9 213 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 ZNF232Q9UNY5 417 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 RCE1Q9Y256 329 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 IGHV4-61A0A0C4DH41 118 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 VSTM5A8MXK1 200 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 RPL36A-HNRNPH2H7BZ11 118 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 UPK3AO75631 287 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 SLC22A3O75751 556 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 ZNF432O94892 652 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 ANP32DO95626 131 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 ERCC1P07992 297 aaPredicted RBP6.61□□□□□ -1.35
NEK3-201ENST00000550331 CECR9P0C854 216 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 PNMTP11086 282 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 PRG2P13727 222 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 ZNF23P17027 643 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 JUNBP17275 347 aaPredicted RBP6.61□□□□□ -1.35
NEK3-201ENST00000550331 GIFP27352 417 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 GTF2E2P29084 291 aaKnown RBP6.61□□□□□ -1.35
NEK3-201ENST00000550331 EPHA3P29320 983 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 IDH3GP51553 393 aaPredicted RBP6.61□□□□□ -1.35
NEK3-201ENST00000550331 ROR2Q01974 943 aaKnown RBP6.61□□□□□ -1.35
NEK3-201ENST00000550331 LGALS3BPQ08380 585 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 CEP85LQ5SZL2 805 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 FAM120AOSQ5T036 256 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 HHATQ5VTY9 493 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 C5orf46Q6UWT4 87 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 C6orf89Q6UWU4 347 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 Q6ZS46 218 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 CBLL1Q75N03 491 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 SERPINA11Q86U17 422 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 LSRQ86X29 649 aaPredicted RBP6.61□□□□□ -1.35
NEK3-201ENST00000550331 CCDC36Q8IYA8 594 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 CLIP4Q8N3C7 705 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 ARIH2OSQ8N7S6 290 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 NEU4Q8WWR8 484 aaPredicted RBP6.61□□□□□ -1.35
NEK3-201ENST00000550331 TMEM19Q96HH6 336 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 ITCHQ96J02 903 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 MAELQ96JY0 434 aaKnown RBP6.61□□□□□ -1.35
NEK3-201ENST00000550331 FOXN4Q96NZ1 517 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 VRK1Q99986 396 aaPredicted RBP6.61□□□□□ -1.35
NEK3-201ENST00000550331 PTDSS2Q9BVG9 487 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 PLA2G12AQ9BZM1 189 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 BPESC1Q9GZL8 116 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 RAB1BQ9H0U4 201 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 CHODLQ9H9P2 273 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 TPT1P8Q9HAU6 139 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 C12orf10Q9HB07 376 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 BCL2L10Q9HD36 194 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 KCNK9Q9NPC2 374 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 SDR39U1Q9NRG7 319 aaPredicted RBP6.61□□□□□ -1.35
NEK3-201ENST00000550331 ZIM2Q9NZV7 527 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 IFT52Q9Y366 437 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 CHST2Q9Y4C5 530 aa6.61□□□□□ -1.35
NEK3-201ENST00000550331 PLCE1Q9P212 2302 aa6.6□□□□□ -1.35
NEK3-201ENST00000550331 A0A096LPE4 126 aa6.6□□□□□ -1.35
NEK3-201ENST00000550331 LOC102725191A0A1B0GVB3 256 aa6.6□□□□□ -1.35
NEK3-201ENST00000550331 A0A1W2PPZ6 126 aa6.6□□□□□ -1.35
NEK3-201ENST00000550331 NR5A2O00482 541 aa6.6□□□□□ -1.35
NEK3-201ENST00000550331 AIM2O14862 343 aa6.6□□□□□ -1.35
NEK3-201ENST00000550331 KCNAB3O43448 404 aa6.6□□□□□ -1.35
NEK3-201ENST00000550331 AKAP8O43823 692 aaKnown RBP6.6□□□□□ -1.35
NEK3-201ENST00000550331 OR2T1O43869 369 aa6.6□□□□□ -1.35
NEK3-201ENST00000550331 SNNO75324 88 aaPredicted RBP6.6□□□□□ -1.35
NEK3-201ENST00000550331 SLC43A1O75387 559 aa6.6□□□□□ -1.35
NEK3-201ENST00000550331 ETS2P15036 469 aa6.6□□□□□ -1.35
NEK3-201ENST00000550331 CBR1P16152 277 aa6.6□□□□□ -1.35
NEK3-201ENST00000550331 ZNF43P17038 809 aa6.6□□□□□ -1.35
NEK3-201ENST00000550331 NPR2P20594 1047 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms