RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 KCNS3Q9BQ31 491 aa14.25□□□□□ -0.13
VPS29-207ENST00000549970 RHNO1Q9BSD3 238 aa14.25□□□□□ -0.13
VPS29-207ENST00000549970 NELFAQ9H3P2 528 aa14.25□□□□□ -0.13
VPS29-207ENST00000549970 IGHV4-30-2A0A087WSY4 118 aa14.24□□□□□ -0.13
VPS29-207ENST00000549970 TRAF3IP2O43734 574 aaPredicted RBP14.24□□□□□ -0.13
VPS29-207ENST00000549970 NQO1P15559 274 aaKnown RBP14.24□□□□□ -0.13
VPS29-207ENST00000549970 CDH12P55289 794 aa14.24□□□□□ -0.13
VPS29-207ENST00000549970 SH3BGRP55822 239 aaPredicted RBP14.24□□□□□ -0.13
VPS29-207ENST00000549970 PCBP3P57721 371 aaKnown RBP14.24□□□□□ -0.13
VPS29-207ENST00000549970 RBBP4Q09028 425 aa14.24□□□□□ -0.13
VPS29-207ENST00000549970 ANKRD16Q6P6B7 361 aa14.24□□□□□ -0.13
VPS29-207ENST00000549970 UEVLDQ8IX04 471 aa14.24□□□□□ -0.13
VPS29-207ENST00000549970 GPR137CQ8N3F9 429 aa14.24□□□□□ -0.13
VPS29-207ENST00000549970 C10orf53Q8N6V4 93 aa14.24□□□□□ -0.13
VPS29-207ENST00000549970 EPYCQ99645 322 aa14.24□□□□□ -0.13
VPS29-207ENST00000549970 SONP18583 2426 aaKnown RBP14.23□□□□□ -0.13
VPS29-207ENST00000549970 ARPC4-TTLL3A0A0A6YYG9 625 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 MS4A18H0YCH9 400 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 H7C417 338 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 M0QX08 132 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 AKAP8O43823 692 aaKnown RBP14.23□□□□□ -0.13
VPS29-207ENST00000549970 SASH3O75995 380 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 HPRP00739 348 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 BGLAPP02818 100 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 TP53P04637 393 aaPredicted RBP14.23□□□□□ -0.13
VPS29-207ENST00000549970 BMP4P12644 408 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 HLA-DOBP13765 273 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 ARF1P84077 181 aaKnown RBP14.23□□□□□ -0.13
VPS29-207ENST00000549970 CHRNB3Q05901 458 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 MFSD13AQ14CX5 517 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 DUSP7Q16829 419 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 CEACAM16Q2WEN9 425 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 MS4A18Q3C1V0 323 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 CARD17Q5XLA6 110 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 CLEC2AQ6UVW9 174 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 PRIMA1Q86XR5 153 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 ZNF525Q8N782 197 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 ADPRHL1Q8NDY3 354 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 PIK3C3Q8NEB9 887 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 MAGEE2Q8TD90 523 aaPredicted RBP14.23□□□□□ -0.13
VPS29-207ENST00000549970 FBXO17Q96EF6 278 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 ZNF837Q96EG3 531 aaPredicted RBP14.23□□□□□ -0.13
VPS29-207ENST00000549970 MOGAT1Q96PD6 335 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 ZNF317Q96PQ6 595 aaPredicted RBP14.23□□□□□ -0.13
VPS29-207ENST00000549970 OR2M2Q96R28 347 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 MCHR1Q99705 422 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 SIKE1Q9BRV8 207 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 ASPNQ9BXN1 380 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 EVA1AQ9H8M9 152 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 GPR35Q9HC97 309 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 CORINQ9Y5Q5 1042 aa14.23□□□□□ -0.13
VPS29-207ENST00000549970 ARFGEF3Q5TH69 2177 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 CPSF4LA6NMK7 179 aaKnown RBP14.22□□□□□ -0.13
VPS29-207ENST00000549970 LRRN3E7EW58 273 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 RPL36A-HNRNPH2H7BZ11 118 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 M0R3G1 203 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 SEC14L2O76054 403 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 CRYAAP02489 173 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 CECR9P0C854 216 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 NAAAQ02083 359 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 POU3F1Q03052 451 aaPredicted RBP14.22□□□□□ -0.13
VPS29-207ENST00000549970 PMS2P3Q13401 168 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 TMEM123Q8N131 208 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 SCAIQ8N9R8 606 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 GPR32P1Q8NGA4 272 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 OR6T1Q8NGN1 323 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 OR6S1Q8NH40 331 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 OR10A6Q8NH74 314 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 VANGL1Q8TAA9 524 aaPredicted RBP14.22□□□□□ -0.13
VPS29-207ENST00000549970 TSPEARQ8WU66 669 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 SLC41A3Q96GZ6 507 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 ARHGDIGQ99819 225 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 TMEM43Q9BTV4 400 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 EMC6Q9BV81 110 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 KATNB1Q9BVA0 655 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 KAT8Q9H7Z6 458 aaKnown RBP14.22□□□□□ -0.13
VPS29-207ENST00000549970 SEC61A2Q9H9S3 476 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 CRLF2Q9HC73 371 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 CRNNQ9UBG3 495 aaPredicted RBP14.22□□□□□ -0.13
VPS29-207ENST00000549970 PMF1-BGLAPU3KQ54 211 aa14.22□□□□□ -0.13
VPS29-207ENST00000549970 LOC102725191A0A1B0GVB3 256 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 SERPINI2O75830 405 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 LY6HO94772 140 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 CELA3BP08861 270 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 HOXB1P14653 301 aaPredicted RBP14.21□□□□□ -0.13
VPS29-207ENST00000549970 AHCYP23526 432 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 PAX7P23759 505 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 CAPZA2P47755 286 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 DSCR9P59020 149 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 SF3A3Q12874 501 aaKnown RBP eCLIP14.21□□□□□ -0.13
VPS29-207ENST00000549970 NPTX1Q15818 432 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 ENTPD8Q5MY95 495 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 PHYHD1Q5SRE7 291 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 SWT1Q5T5J6 900 aaKnown RBP14.21□□□□□ -0.13
VPS29-207ENST00000549970 ZNF613Q6PF04 617 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 VHLLQ6RSH7 139 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 RBM45Q8IUH3 476 aaKnown RBP14.21□□□□□ -0.13
VPS29-207ENST00000549970 ANKK1Q8NFD2 765 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 OR10H5Q8NGA6 315 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 SLC26A7Q8TE54 656 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms