RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 ZNF786Q8N393 782 aa11.14□□□□□ -0.63
PTCH1-218ENST00000548945 RFLNBQ8N5W9 214 aa11.14□□□□□ -0.63
PTCH1-218ENST00000548945 OXGR1Q96P68 337 aa11.14□□□□□ -0.63
PTCH1-218ENST00000548945 DOK1Q99704 481 aa11.14□□□□□ -0.63
PTCH1-218ENST00000548945 PTDSS2Q9BVG9 487 aa11.14□□□□□ -0.63
PTCH1-218ENST00000548945 TPT1P8Q9HAU6 139 aa11.14□□□□□ -0.63
PTCH1-218ENST00000548945 SLC6A13Q9NSD5 602 aa11.14□□□□□ -0.63
PTCH1-218ENST00000548945 CHST2Q9Y4C5 530 aa11.14□□□□□ -0.63
PTCH1-218ENST00000548945 IGHV2OR16-5A0A0B4J2B6 119 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 LOC102725191A0A1B0GVB3 256 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 SLCO1B7G3V0H7 640 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 AIM2O14862 343 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 AKAP8O43823 692 aaKnown RBP11.13□□□□□ -0.63
PTCH1-218ENST00000548945 GTF2E2P29084 291 aaKnown RBP11.13□□□□□ -0.63
PTCH1-218ENST00000548945 EPHA3P29320 983 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 THBS4P35443 961 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 CLDN17P56750 224 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 WDR4P57081 412 aaKnown RBP11.13□□□□□ -0.63
PTCH1-218ENST00000548945 TUBA1BP68363 451 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 TUBA4AP68366 448 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 ARF1P84077 181 aaKnown RBP11.13□□□□□ -0.63
PTCH1-218ENST00000548945 EGR4Q05215 589 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 VHLLQ6RSH7 139 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 TUBA1AQ71U36 451 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 LSRQ86X29 649 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-218ENST00000548945 LINC01356Q8N9X3 169 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 PIK3C3Q8NEB9 887 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 C1orf159Q96HA4 380 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 TMEM19Q96HH6 336 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 ITCHQ96J02 903 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 PAIP2Q9BPZ3 127 aaKnown RBP11.13□□□□□ -0.63
PTCH1-218ENST00000548945 CCDC134Q9H6E4 229 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 WDR55Q9H6Y2 383 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-218ENST00000548945 RMND5AQ9H871 391 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 GPR35Q9HC97 309 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 BCL2L10Q9HD36 194 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 THAP1Q9NVV9 213 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 ZIM2Q9NZV7 527 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 B3GAT1Q9P2W7 334 aa11.13□□□□□ -0.63
PTCH1-218ENST00000548945 TMEM129A0AVI4 362 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 HAX1O00165 279 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 LILRA1O75019 489 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 SNNO75324 88 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-218ENST00000548945 ANP32DO95626 131 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 CELA3BP08861 270 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 BMP2P12643 396 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 PCMT1P22061 227 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 LSP1P33241 339 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 RPS5P46782 204 aaKnown RBP11.12□□□□□ -0.63
PTCH1-218ENST00000548945 EVX1P49640 407 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 RIN1Q13671 783 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 ZNF311Q5JNZ3 666 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 RPS26P11Q5JNZ5 115 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-218ENST00000548945 FAM69AQ5T7M9 428 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 NET1Q7Z628 596 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-218ENST00000548945 MYPOPQ86VE0 399 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-218ENST00000548945 GPR137CQ8N3F9 429 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 LSMEM1Q8N8F7 131 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 ADPRHL1Q8NDY3 354 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 UBASH3BQ8TF42 649 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 CKAP2Q8WWK9 683 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 SLC38A4Q969I6 547 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 SLC25A36Q96CQ1 311 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 KTI12Q96EK9 354 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-218ENST00000548945 MAELQ96JY0 434 aaKnown RBP11.12□□□□□ -0.63
PTCH1-218ENST00000548945 MAGEB18Q96M61 343 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 SOX7Q9BT81 388 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 RAD21L1Q9H4I0 556 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 SEC61A2Q9H9S3 476 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 CRLF2Q9HC73 371 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 A4GALTQ9NPC4 353 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 SDR39U1Q9NRG7 319 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-218ENST00000548945 USP22Q9UPT9 525 aa11.12□□□□□ -0.63
PTCH1-218ENST00000548945 WNK2Q9Y3S1 2297 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 LRP5LA4QPB2 252 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 ZNF99A8MXY4 864 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-218ENST00000548945 TCF21O43680 179 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 TRAF3IP2O43734 574 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-218ENST00000548945 APEX1P27695 318 aaKnown RBP11.11□□□□□ -0.63
PTCH1-218ENST00000548945 CDH15P55291 814 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 GABPB1Q06547 395 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-218ENST00000548945 FADDQ13158 208 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 C1DQ13901 141 aaKnown RBP11.11□□□□□ -0.63
PTCH1-218ENST00000548945 DAG1Q14118 895 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 MFSD13AQ14CX5 517 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 CEACAM16Q2WEN9 425 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 ATG16L1Q676U5 607 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 H1FNTQ75WM6 255 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-218ENST00000548945 ZNF627Q7L945 461 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 SPATA21Q7Z572 469 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 TMEM123Q8N131 208 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 KDM8Q8N371 416 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 SVOPLQ8N434 492 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 BBS10Q8TAM1 723 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 DNAJA4Q8WW22 397 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-218ENST00000548945 LRR1Q96L50 414 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 OR2M2Q96R28 347 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 DENND2DQ9H6A0 471 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-218ENST00000548945 NOX3Q9HBY0 568 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 DYNLRB1Q9NP97 96 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms