RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 OR2T1O43869 369 aa15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 SLC43A1O75387 559 aa15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 CELA3BP08861 270 aa15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 USF1P22415 310 aaPredicted RBP15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 SERPINF1P36955 418 aa15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 ARF1P84077 181 aaKnown RBP15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 ADIPOQQ15848 244 aa15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 ALG10BQ5I7T1 473 aa15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 REEP3Q6NUK4 255 aa15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 PODNL1Q6PEZ8 512 aa15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 ANKS4BQ8N8V4 417 aa15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 DNAJA4Q8WW22 397 aaPredicted RBP15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 ZNF837Q96EG3 531 aaPredicted RBP15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 OR2M2Q96R28 347 aa15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 CCDC28BQ9BUN5 200 aa15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 PRR14Q9BWN1 585 aa15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 GPR35Q9HC97 309 aa15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 MOV10Q9HCE1 1003 aaKnown RBP15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 TMEM160Q9NX00 188 aa15.11■□□□□ 0.01
CHMP1A-205ENST00000548650 A0A0B4J2E0 115 aa15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 A0A1B0GX12 115 aa15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 HPRP00739 348 aa15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 HOXB1P14653 301 aaPredicted RBP15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 PPIBP23284 216 aaKnown RBP15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 RGS8P57771 180 aaPredicted RBP15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 SCARB2Q14108 478 aa15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 EFNB3Q15768 340 aa15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 CEACAM16Q2WEN9 425 aa15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 FAM91A1Q658Y4 838 aa15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 ULK3Q6PHR2 472 aa15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 SLC46A3Q7Z3Q1 461 aa15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 KRT73Q86Y46 540 aa15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 NUP37Q8NFH4 326 aa15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 LRRC8CQ8TDW0 803 aa15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 SLC41A3Q96GZ6 507 aa15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 CPPED1Q9BRF8 314 aaPredicted RBP15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 SPATA5L1Q9BVQ7 753 aa15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 TMEM38AQ9H6F2 299 aa15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 CRLF2Q9HC73 371 aa15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 CDC42EP3Q9UKI2 254 aa15.1■□□□□ 0.01
CHMP1A-205ENST00000548650 LOC102725191A0A1B0GVB3 256 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 B9A039 149 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 NDUFS8O00217 210 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 AKAP8O43823 692 aaKnown RBP15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 SEC14L2O76054 403 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 IFNA2P01563 188 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 OR4A8P0C604 315 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 FAM157CP0CG43 387 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 CBR1P16152 277 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 GPX2P18283 190 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 AQP1P29972 269 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 PPOXP50336 477 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 PDLIM4P50479 330 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 ATP4BP51164 291 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 IDH3GP51553 393 aaPredicted RBP15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 AQP5P55064 265 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 NCALDP61601 193 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 HGFACQ04756 655 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 C1DQ13901 141 aaKnown RBP15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 ADRM1Q16186 407 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 PHYHD1Q5SRE7 291 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 VHLLQ6RSH7 139 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 H1FNTQ75WM6 255 aaPredicted RBP15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 GPR137CQ8N3F9 429 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 PIK3C3Q8NEB9 887 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 OR6S1Q8NH40 331 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 WFDC6Q9BQY6 131 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 PIMREGQ9BSJ6 248 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 PLK3Q9H4B4 646 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 ZNF442Q9H7R0 627 aa15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.09■□□□□ 0.01
CHMP1A-205ENST00000548650 A0A087WUJ7 227 aa15.08■□□□□ 0
CHMP1A-205ENST00000548650 IGHV2OR16-5A0A0B4J2B6 119 aa15.08■□□□□ 0
CHMP1A-205ENST00000548650 ZNF99A8MXY4 864 aaPredicted RBP15.08■□□□□ 0
CHMP1A-205ENST00000548650 TPST2O60704 377 aa15.08■□□□□ 0
CHMP1A-205ENST00000548650 BGLAPP02818 100 aa15.08■□□□□ 0
CHMP1A-205ENST00000548650 HLA-DOBP13765 273 aa15.08■□□□□ 0
CHMP1A-205ENST00000548650 CBLP22681 906 aa15.08■□□□□ 0
CHMP1A-205ENST00000548650 NR4A2P43354 598 aa15.08■□□□□ 0
CHMP1A-205ENST00000548650 GGTLC2Q14390 218 aa15.08■□□□□ 0
CHMP1A-205ENST00000548650 SQLEQ14534 574 aa15.08■□□□□ 0
CHMP1A-205ENST00000548650 CYB5R2Q6BCY4 276 aa15.08■□□□□ 0
CHMP1A-205ENST00000548650 NET1Q7Z628 596 aaPredicted RBP15.08■□□□□ 0
CHMP1A-205ENST00000548650 SCAIQ8N9R8 606 aa15.08■□□□□ 0
CHMP1A-205ENST00000548650 OR4F15Q8NGB8 312 aa15.08■□□□□ 0
CHMP1A-205ENST00000548650 SLC47A1Q96FL8 570 aa15.08■□□□□ 0
CHMP1A-205ENST00000548650 KCNK17Q96T54 332 aa15.08■□□□□ 0
CHMP1A-205ENST00000548650 VRK1Q99986 396 aaPredicted RBP15.08■□□□□ 0
CHMP1A-205ENST00000548650 MYOZ1Q9NP98 299 aaPredicted RBP15.08■□□□□ 0
CHMP1A-205ENST00000548650 CORO2BQ9UQ03 480 aa15.08■□□□□ 0
CHMP1A-205ENST00000548650 CORINQ9Y5Q5 1042 aa15.08■□□□□ 0
CHMP1A-205ENST00000548650 IGHV4-61A0A0C4DH41 118 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 PRORSD1PA6NEY8 169 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 RNF212BA8MTL3 300 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 MS4A18H0YCH9 400 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 SLC6A2P23975 617 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 ARR3P36575 388 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 PCBP3P57721 371 aaKnown RBP15.07■□□□□ 0
CHMP1A-205ENST00000548650 LSM11P83369 360 aaKnown RBP eCLIP15.07■□□□□ 0
CHMP1A-205ENST00000548650 IL1RL1Q01638 556 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms