RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 TCF21O43680 179 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 PDE5AO76074 875 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 GSNP06396 782 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 LYNX1P0DP58 116 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 PRG2P13727 222 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 GIFP27352 417 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 APEX1P27695 318 aaKnown RBP14.26□□□□□ -0.13
SSH1-208ENST00000548522 THBS4P35443 961 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 MRPL19P49406 292 aaKnown RBP14.26□□□□□ -0.13
SSH1-208ENST00000548522 UBE2NP61088 152 aaKnown RBP14.26□□□□□ -0.13
SSH1-208ENST00000548522 KLF10Q13118 480 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 CCNIQ14094 377 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 SMU1Q2TAY7 513 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 LIPNQ5VXI9 398 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 NIPAL3Q6P499 406 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 ZNF836Q6ZNA1 936 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 LRRC74BQ6ZQY2 392 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 CREB3L2Q70SY1 520 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 VRK2Q86Y07 508 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 CDK20Q8IZL9 346 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 KDM8Q8N371 416 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 CADM2Q8N3J6 435 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 RBM15BQ8NDT2 890 aaKnown RBP14.26□□□□□ -0.13
SSH1-208ENST00000548522 RP9Q8TA86 221 aaKnown RBP14.26□□□□□ -0.13
SSH1-208ENST00000548522 CCDC115Q96NT0 180 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 SEC14L4Q9UDX3 406 aa14.26□□□□□ -0.13
SSH1-208ENST00000548522 CCDC154A6NI56 674 aa14.25□□□□□ -0.13
SSH1-208ENST00000548522 TACSTD2P09758 323 aa14.25□□□□□ -0.13
SSH1-208ENST00000548522 IL7RP16871 459 aa14.25□□□□□ -0.13
SSH1-208ENST00000548522 CXCR1P25024 350 aa14.25□□□□□ -0.13
SSH1-208ENST00000548522 SRP14P37108 136 aaKnown RBP14.25□□□□□ -0.13
SSH1-208ENST00000548522 ACAA2P42765 397 aaKnown RBP14.25□□□□□ -0.13
SSH1-208ENST00000548522 MAPRE2Q15555 327 aa14.25□□□□□ -0.13
SSH1-208ENST00000548522 TRMT5Q32P41 509 aaKnown RBP14.25□□□□□ -0.13
SSH1-208ENST00000548522 C1QTNF12Q5T7M4 302 aa14.25□□□□□ -0.13
SSH1-208ENST00000548522 PRAMEF8Q5VWM4 474 aa14.25□□□□□ -0.13
SSH1-208ENST00000548522 PRAMEF7Q5VXH5 474 aa14.25□□□□□ -0.13
SSH1-208ENST00000548522 RINLQ6ZS11 566 aa14.25□□□□□ -0.13
SSH1-208ENST00000548522 ABHD12BQ7Z5M8 362 aaPredicted RBP14.25□□□□□ -0.13
SSH1-208ENST00000548522 NET1Q7Z628 596 aaPredicted RBP14.25□□□□□ -0.13
SSH1-208ENST00000548522 MEX3DQ86XN8 651 aaKnown RBP14.25□□□□□ -0.13
SSH1-208ENST00000548522 RFLNBQ8N5W9 214 aa14.25□□□□□ -0.13
SSH1-208ENST00000548522 VPS37AQ8NEZ2 397 aa14.25□□□□□ -0.13
SSH1-208ENST00000548522 NUF2Q9BZD4 464 aa14.25□□□□□ -0.13
SSH1-208ENST00000548522 RAB1BQ9H0U4 201 aa14.25□□□□□ -0.13
SSH1-208ENST00000548522 SLC6A13Q9NSD5 602 aa14.25□□□□□ -0.13
SSH1-208ENST00000548522 TMEFF2Q9UIK5 374 aaPredicted RBP14.25□□□□□ -0.13
SSH1-208ENST00000548522 TMEM129A0AVI4 362 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 SH3PXD2BA1X283 911 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 CDHR4A6H8M9 788 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 WIPF1O43516 503 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 SEC14L2O76054 403 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 IGKV3-15P01624 115 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 DBIP07108 87 aaKnown RBP14.24□□□□□ -0.13
SSH1-208ENST00000548522 ALDOCP09972 364 aaKnown RBP14.24□□□□□ -0.13
SSH1-208ENST00000548522 NR2F1P10589 423 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 UQCRBP14927 111 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 IL12AP29459 219 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 S100A3P33764 101 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 MAP2K6P52564 334 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 CHN2P52757 468 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 UFM1P61960 85 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 ROR2Q01974 943 aaKnown RBP14.24□□□□□ -0.13
SSH1-208ENST00000548522 MSMPQ1L6U9 139 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 C1orf140Q5VVS0 124 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 TMEM225Q6GV28 225 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 ZNF540Q8NDQ6 660 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 NUP37Q8NFH4 326 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 ZNF837Q96EG3 531 aaPredicted RBP14.24□□□□□ -0.13
SSH1-208ENST00000548522 OR52B2Q96RD2 323 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 PANX1Q96RD7 426 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 DOK1Q99704 481 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 TPK1Q9H3S4 243 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 MTHFD2LQ9H903 347 aaPredicted RBP14.24□□□□□ -0.13
SSH1-208ENST00000548522 RNPEPL1Q9HAU8 725 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 BTNL2Q9UIR0 455 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 PRPF19Q9UMS4 504 aaKnown RBP14.24□□□□□ -0.13
SSH1-208ENST00000548522 CHST2Q9Y4C5 530 aa14.24□□□□□ -0.13
SSH1-208ENST00000548522 DSPPQ9NZW4 1301 aa14.23□□□□□ -0.13
SSH1-208ENST00000548522 IGHV2OR16-5A0A0B4J2B6 119 aa14.23□□□□□ -0.13
SSH1-208ENST00000548522 NPIPB7O75200 414 aa14.23□□□□□ -0.13
SSH1-208ENST00000548522 VENTXO95231 258 aa14.23□□□□□ -0.13
SSH1-208ENST00000548522 COX4I1P13073 169 aa14.23□□□□□ -0.13
SSH1-208ENST00000548522 NCF2P19878 526 aaPredicted RBP14.23□□□□□ -0.13
SSH1-208ENST00000548522 CDH15P55291 814 aa14.23□□□□□ -0.13
SSH1-208ENST00000548522 ARF1P84077 181 aaKnown RBP14.23□□□□□ -0.13
SSH1-208ENST00000548522 RUNX1T1Q06455 604 aa14.23□□□□□ -0.13
SSH1-208ENST00000548522 NPRL3Q12980 569 aa14.23□□□□□ -0.13
SSH1-208ENST00000548522 RIN1Q13671 783 aa14.23□□□□□ -0.13
SSH1-208ENST00000548522 GNA13Q14344 377 aa14.23□□□□□ -0.13
SSH1-208ENST00000548522 RPS26P11Q5JNZ5 115 aaPredicted RBP14.23□□□□□ -0.13
SSH1-208ENST00000548522 CLIP4Q8N3C7 705 aa14.23□□□□□ -0.13
SSH1-208ENST00000548522 LINC01356Q8N9X3 169 aa14.23□□□□□ -0.13
SSH1-208ENST00000548522 OR4F15Q8NGB8 312 aa14.23□□□□□ -0.13
SSH1-208ENST00000548522 MAGEE2Q8TD90 523 aaPredicted RBP14.23□□□□□ -0.13
SSH1-208ENST00000548522 PTDSS2Q9BVG9 487 aa14.23□□□□□ -0.13
SSH1-208ENST00000548522 TAPBPLQ9BX59 468 aa14.23□□□□□ -0.13
SSH1-208ENST00000548522 PLA2G12AQ9BZM1 189 aa14.23□□□□□ -0.13
SSH1-208ENST00000548522 DENND2DQ9H6A0 471 aaPredicted RBP14.23□□□□□ -0.13
SSH1-208ENST00000548522 ZNF442Q9H7R0 627 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms