RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 C8orf59Q8N0T1 100 aaPredicted RBP25.72■■□□□ 1.71
BRF1-213ENST00000548421 KDM8Q8N371 416 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 ANKK1Q8NFD2 765 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 SLC38A2Q96QD8 506 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 UCN2Q96RP3 112 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 POLDIP3Q9BY77 421 aaKnown RBP25.72■■□□□ 1.71
BRF1-213ENST00000548421 NPIPA2E9PIF3 369 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 NPIPA3F8WFD2 350 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 VAMP5O95183 116 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 HMGN1P05114 100 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 APEHP13798 732 aaKnown RBP25.72■■□□□ 1.71
BRF1-213ENST00000548421 MYF6P23409 242 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 GRK5P34947 590 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 ERVK-25P63136 954 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 PXKQ7Z7A4 578 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 DEPDC4Q8N2C3 294 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 CNBD2Q96M20 576 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 ERMAPQ96PL5 475 aaPredicted RBP25.72■■□□□ 1.71
BRF1-213ENST00000548421 IMPAD1Q9NX62 359 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 B3GAT1Q9P2W7 334 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 ADAM18Q9Y3Q7 739 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 IER3IP1Q9Y5U9 82 aa25.72■■□□□ 1.71
BRF1-213ENST00000548421 ATRXP46100 2492 aa25.71■■□□□ 1.71
BRF1-213ENST00000548421 SPTA1P02549 2419 aa25.71■■□□□ 1.71
BRF1-213ENST00000548421 ARPC3O15145 178 aa25.71■■□□□ 1.71
BRF1-213ENST00000548421 NOS3P29474 1203 aa25.71■■□□□ 1.71
BRF1-213ENST00000548421 TDGF1P3P51864 188 aa25.71■■□□□ 1.71
BRF1-213ENST00000548421 GPAT4Q86UL3 456 aa25.71■■□□□ 1.71
BRF1-213ENST00000548421 OXGR1Q96P68 337 aa25.71■■□□□ 1.71
BRF1-213ENST00000548421 SLX1AQ9BQ83 275 aa25.71■■□□□ 1.71
BRF1-213ENST00000548421 TVP23BQ9NYZ1 205 aa25.71■■□□□ 1.71
BRF1-213ENST00000548421 MCTS1Q9ULC4 181 aaKnown RBP25.71■■□□□ 1.71
BRF1-213ENST00000548421 NOX1Q9Y5S8 564 aa25.71■■□□□ 1.71
BRF1-213ENST00000548421 HSPE1-MOB4S4R3N1 261 aa25.71■■□□□ 1.71
BRF1-213ENST00000548421 LOC102725191A0A1B0GVB3 256 aa25.7■■□□□ 1.7
BRF1-213ENST00000548421 A0A1W2PRG6 482 aa25.7■■□□□ 1.7
BRF1-213ENST00000548421 IDH3BO43837 385 aa25.7■■□□□ 1.7
BRF1-213ENST00000548421 RAMP1O60894 148 aa25.7■■□□□ 1.7
BRF1-213ENST00000548421 SERPINI2O75830 405 aa25.7■■□□□ 1.7
BRF1-213ENST00000548421 SYNGR4O95473 234 aa25.7■■□□□ 1.7
BRF1-213ENST00000548421 PLGP00747 810 aaPredicted RBP25.7■■□□□ 1.7
BRF1-213ENST00000548421 POU3F1Q03052 451 aaPredicted RBP25.7■■□□□ 1.7
BRF1-213ENST00000548421 MED21Q13503 144 aa25.7■■□□□ 1.7
BRF1-213ENST00000548421 FAM122BQ7Z309 247 aa25.7■■□□□ 1.7
BRF1-213ENST00000548421 UEVLDQ8IX04 471 aa25.7■■□□□ 1.7
BRF1-213ENST00000548421 CACNA1BQ00975 2339 aa25.69■■□□□ 1.7
BRF1-213ENST00000548421 IMPA2O14732 288 aa25.69■■□□□ 1.7
BRF1-213ENST00000548421 SURF4O15260 269 aa25.69■■□□□ 1.7
BRF1-213ENST00000548421 IGHMP01871 453 aa25.69■■□□□ 1.7
BRF1-213ENST00000548421 HLA-DOBP13765 273 aa25.69■■□□□ 1.7
BRF1-213ENST00000548421 IL5RAQ01344 420 aa25.69■■□□□ 1.7
BRF1-213ENST00000548421 POU4F3Q15319 338 aa25.69■■□□□ 1.7
BRF1-213ENST00000548421 SNAPC1Q16533 368 aa25.69■■□□□ 1.7
BRF1-213ENST00000548421 PRR30Q53SZ7 412 aaPredicted RBP25.69■■□□□ 1.7
BRF1-213ENST00000548421 ABLIM2Q6H8Q1 611 aa25.69■■□□□ 1.7
BRF1-213ENST00000548421 FCRLAQ7L513 359 aa25.69■■□□□ 1.7
BRF1-213ENST00000548421 ROBO4Q8WZ75 1007 aa25.69■■□□□ 1.7
BRF1-213ENST00000548421 TSPAN32Q96QS1 320 aa25.69■■□□□ 1.7
BRF1-213ENST00000548421 TUBA1CQ9BQE3 449 aa25.69■■□□□ 1.7
BRF1-213ENST00000548421 TXNIPQ9H3M7 391 aa25.69■■□□□ 1.7
BRF1-213ENST00000548421 ASF1BQ9NVP2 202 aa25.69■■□□□ 1.7
BRF1-213ENST00000548421 KLHL13Q9P2N7 655 aa25.69■■□□□ 1.7
BRF1-213ENST00000548421 GTF3C1Q12789 2109 aa25.68■■□□□ 1.7
BRF1-213ENST00000548421 NPIPB13A6NJU9 1138 aa25.68■■□□□ 1.7
BRF1-213ENST00000548421 NPIPB4C9JG80 1138 aa25.68■■□□□ 1.7
BRF1-213ENST00000548421 SDHAP31040 664 aa25.68■■□□□ 1.7
BRF1-213ENST00000548421 PCYT1AP49585 367 aa25.68■■□□□ 1.7
BRF1-213ENST00000548421 TOP3AQ13472 1001 aaPredicted RBP25.68■■□□□ 1.7
BRF1-213ENST00000548421 PON3Q15166 354 aa25.68■■□□□ 1.7
BRF1-213ENST00000548421 EMC4Q5J8M3 183 aa25.68■■□□□ 1.7
BRF1-213ENST00000548421 SLC35F1Q5T1Q4 408 aa25.68■■□□□ 1.7
BRF1-213ENST00000548421 GPR139Q6DWJ6 353 aa25.68■■□□□ 1.7
BRF1-213ENST00000548421 FGD2Q7Z6J4 655 aa25.68■■□□□ 1.7
BRF1-213ENST00000548421 THAP5Q7Z6K1 395 aa25.68■■□□□ 1.7
BRF1-213ENST00000548421 TRUB1Q8WWH5 349 aaKnown RBP25.68■■□□□ 1.7
BRF1-213ENST00000548421 PLEKHA8Q96JA3 519 aa25.68■■□□□ 1.7
BRF1-213ENST00000548421 SF3B5Q9BWJ5 86 aaKnown RBP25.68■■□□□ 1.7
BRF1-213ENST00000548421 GRHPRQ9UBQ7 328 aa25.68■■□□□ 1.7
BRF1-213ENST00000548421 RNF6Q9Y252 685 aa25.68■■□□□ 1.7
BRF1-213ENST00000548421 LRCH1Q9Y2L9 728 aa25.68■■□□□ 1.7
BRF1-213ENST00000548421 M0R129 80 aa25.67■■□□□ 1.7
BRF1-213ENST00000548421 ZNHIT1O43257 154 aa25.67■■□□□ 1.7
BRF1-213ENST00000548421 TXNDC12O95881 172 aa25.67■■□□□ 1.7
BRF1-213ENST00000548421 ZNF43P17038 809 aa25.67■■□□□ 1.7
BRF1-213ENST00000548421 PTGS2P35354 604 aa25.67■■□□□ 1.7
BRF1-213ENST00000548421 DAP3P51398 398 aaKnown RBP25.67■■□□□ 1.7
BRF1-213ENST00000548421 ISL1P61371 349 aa25.67■■□□□ 1.7
BRF1-213ENST00000548421 C1DQ13901 141 aaKnown RBP25.67■■□□□ 1.7
BRF1-213ENST00000548421 ACKR1Q16570 336 aa25.67■■□□□ 1.7
BRF1-213ENST00000548421 ENTHD1Q8IYW4 607 aa25.67■■□□□ 1.7
BRF1-213ENST00000548421 MARVELD2Q8N4S9 558 aa25.67■■□□□ 1.7
BRF1-213ENST00000548421 LSM14AQ8ND56 463 aaKnown RBP25.67■■□□□ 1.7
BRF1-213ENST00000548421 ZPLD1Q8TCW7 415 aa25.67■■□□□ 1.7
BRF1-213ENST00000548421 Q96M85 177 aa25.67■■□□□ 1.7
BRF1-213ENST00000548421 CMC2Q9NRP2 79 aa25.67■■□□□ 1.7
BRF1-213ENST00000548421 ZNF346Q9UL40 294 aaKnown RBP25.67■■□□□ 1.7
BRF1-213ENST00000548421 TTLL8A6PVC2 850 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 CLCA1A8K7I4 914 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 MPZL2O60487 215 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 CYTIPO60759 359 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms