RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 PUDPQ08623 228 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 FOXF1Q12946 379 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 MOGQ16653 247 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 ZNF322Q6U7Q0 402 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-215ENST00000547672 ARSKQ6UWY0 536 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 PXKQ7Z7A4 578 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 IGFN1Q86VF2 1251 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 SYS1Q8N2H4 156 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 WDSUB1Q8N9V3 476 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 CYB561A3Q8NBI2 242 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 LSM14AQ8ND56 463 aaKnown RBP12.14□□□□□ -0.47
PTCH1-215ENST00000547672 SDR9C7Q8NEX9 313 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 OR4F15Q8NGB8 312 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 FNDC8Q8TC99 324 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 S100ZQ8WXG8 99 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 Q96M85 177 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 OPALINQ96PE5 141 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 NMNAT3Q96T66 252 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 PHOX2BQ99453 314 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 DDOQ99489 341 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 UTP23Q9BRU9 249 aaKnown RBP12.14□□□□□ -0.47
PTCH1-215ENST00000547672 NAA11Q9BSU3 229 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-215ENST00000547672 MED20Q9H944 212 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 CHST11Q9NPF2 352 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 FANCFQ9NPI8 374 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 ASB6Q9NWX5 421 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 DKKL1Q9UK85 242 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 ZNF346Q9UL40 294 aaKnown RBP12.14□□□□□ -0.47
PTCH1-215ENST00000547672 ADAM18Q9Y3Q7 739 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 FKBP7Q9Y680 259 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 LOC101059948A0A1B0GTJ6 334 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 LOC102725191A0A1B0GVB3 256 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 A0A1W2PNU3 283 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-215ENST00000547672 LIPT2A6NK58 231 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 CDRT15L2A8MXV6 281 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 FTCDNL1E5RQL4 147 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 PROB1E7EW31 1015 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 NPIPA5E9PKD4 350 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 ZNF670-ZNF695F2Z2N8 137 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 TLX3O43711 291 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-215ENST00000547672 F13BP05160 661 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 GAAP10253 952 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 ZNF182P17025 639 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-215ENST00000547672 GABRA5P31644 462 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 ACVR1BP36896 505 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 GBX2P52951 348 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-215ENST00000547672 CSNK2A1P68400 391 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-215ENST00000547672 OC90Q02509 493 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-215ENST00000547672 DCAF10Q5QP82 559 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 SLC6A19Q695T7 634 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 FCRLBQ6BAA4 426 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 PLEKHG7Q6ZR37 379 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 SLC16A9Q7RTY1 509 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 CROCCP3Q8IVE0 287 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 PHC2Q8IXK0 858 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 KCNE4Q8WWG9 221 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 GATAD2BQ8WXI9 593 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 C5orf34Q96MH7 638 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 ALG12Q9BV10 488 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 ALG8Q9BVK2 526 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 DCSTAMPQ9H295 470 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 MMP27Q9H306 513 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 ADGRL4Q9HBW9 690 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 BOKQ9UMX3 212 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-215ENST00000547672 NPIPA1Q9UND3 350 aa12.13□□□□□ -0.47
PTCH1-215ENST00000547672 RPH3AQ9Y2J0 694 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-215ENST00000547672 ARPC4-TTLL3A0A0A6YYG9 625 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 LOC100506127A0A0U1RQW1 187 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 SPAARA0A1B0GVQ0 90 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 ZC3H12DA2A288 527 aaKnown RBP12.12□□□□□ -0.47
PTCH1-215ENST00000547672 OR6C68A6NDL8 312 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 HSPB2A8KAH6 182 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 ARHGEF9O43307 516 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 DNPH1O43598 174 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 VAMP5O95183 116 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 PMS2P2O95744 297 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 CELA2AP08217 269 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 CCL3P10147 92 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 F8A1P23610 371 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 SRD5A2P31213 254 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 CDKN2AP42771 156 aaKnown RBP12.12□□□□□ -0.47
PTCH1-215ENST00000547672 VBP1P61758 197 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 ATP1A4Q13733 1029 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 SPCS2Q15005 226 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 OR7A5Q15622 319 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 HSPB2Q16082 182 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 ZNF239Q16600 458 aaKnown RBP12.12□□□□□ -0.47
PTCH1-215ENST00000547672 CCDC58Q4VC31 144 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 PRAMEF20Q5VT98 475 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 BICRALQ6AI39 1079 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 ATCAYQ86WG3 371 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 SLC35F2Q8IXU6 374 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 MS4A15Q8N5U1 240 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 ZNF417Q8TAU3 575 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 DYNC2LI1Q8TCX1 351 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 ADAMTS17Q8TE56 1095 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 SNX33Q8WV41 574 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 ADAMTS14Q8WXS8 1223 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 KISS1RQ969F8 398 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-215ENST00000547672 RASD2Q96D21 266 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms