RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ZNRF1Q8ND25 227 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 TMEM104Q8NE00 496 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 OR52I1Q8NGK6 324 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 OR9G4Q8NGQ1 327 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 OR2T6Q8NHC8 308 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 LRRC20Q8TCA0 184 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 CRYGNQ8WXF5 182 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 UFD1Q92890 307 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 CIDECQ96AQ7 238 aaPredicted RBP3.47□□□□□ -1.85
SCAF11-210ENST00000547654 TMIGD2Q96BF3 282 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 C8orf44Q96CB5 159 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 ZBED6CLQ96FA7 236 aaPredicted RBP3.47□□□□□ -1.85
SCAF11-210ENST00000547654 DYRK4Q9NR20 520 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 NUDT4Q9NZJ9 180 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 WRAP73Q9P2S5 460 aaPredicted RBP3.47□□□□□ -1.85
SCAF11-210ENST00000547654 SLC2A6Q9UGQ3 507 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 KCNIP3Q9Y2W7 256 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 GMEB1Q9Y692 573 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 PKD1L3Q7Z443 1732 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 COL2A1P02458 1487 aaPredicted RBP3.47□□□□□ -1.85
SCAF11-210ENST00000547654 PXDNQ92626 1479 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 MKI67P46013 3256 aaKnown RBP3.46□□□□□ -1.85
SCAF11-210ENST00000547654 CENPJQ9HC77 1338 aaPredicted RBP3.46□□□□□ -1.85
SCAF11-210ENST00000547654 SALL1Q9NSC2 1324 aa3.46□□□□□ -1.85
SCAF11-210ENST00000547654 GCC2Q8IWJ2 1684 aa3.46□□□□□ -1.85
SCAF11-210ENST00000547654 TROQ12816 1431 aaPredicted RBP3.46□□□□□ -1.86
SCAF11-210ENST00000547654 EHBP1L1Q8N3D4 1523 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 VCANP13611 3396 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 EIF2AK4Q9P2K8 1649 aaKnown RBP3.46□□□□□ -1.86
SCAF11-210ENST00000547654 KBTBD11-OT1A0A1B0GTJ5 212 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 CCT8L1PA6NM43 557 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 SERPINE3A8MV23 424 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 DYNC1I1O14576 645 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 RAB29O14966 203 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 HUS1O60921 280 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 SH3BGRLO75368 114 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 IGHG1P01857 330 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 H2AFZP0C0S5 128 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 UBCP0CG48 685 aaKnown RBP3.46□□□□□ -1.86
SCAF11-210ENST00000547654 ABOP16442 354 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 DCKP27707 260 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 IL12AP29459 219 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 OPRD1P41143 372 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 MRPL19P49406 292 aaKnown RBP3.46□□□□□ -1.86
SCAF11-210ENST00000547654 ATP4BP51164 291 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 VLDLRP98155 873 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 FKBP3Q00688 224 aaKnown RBP3.46□□□□□ -1.86
SCAF11-210ENST00000547654 IRF8Q02556 426 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 ITIH4Q14624 930 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 GNMTQ14749 295 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 DUSP7Q16829 419 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 XKR4Q5GH76 650 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 OR52W1Q6IF63 320 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 SLC25A25Q6KCM7 469 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 FAM53AQ6NSI3 398 aaPredicted RBP3.46□□□□□ -1.86
SCAF11-210ENST00000547654 ERICH5Q6P6B1 374 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 CCDC137Q6PK04 289 aaKnown RBP3.46□□□□□ -1.86
SCAF11-210ENST00000547654 APLFQ8IW19 511 aaPredicted RBP3.46□□□□□ -1.86
SCAF11-210ENST00000547654 MCOLN2Q8IZK6 566 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 ASCC1Q8N9N2 400 aaKnown RBP3.46□□□□□ -1.86
SCAF11-210ENST00000547654 OR52H1Q8NGJ2 320 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 OR13C9Q8NGT0 318 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 OR9A4Q8NGU2 314 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 PLPPR1Q8TBJ4 325 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 DTX3LQ8TDB6 740 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 PAQR8Q8TEZ7 354 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.46□□□□□ -1.86
SCAF11-210ENST00000547654 ASZ1Q8WWH4 475 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 TOMM40LQ969M1 308 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 NABP1Q96AH0 204 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 ANKRD9Q96BM1 317 aaPredicted RBP3.46□□□□□ -1.86
SCAF11-210ENST00000547654 CCDC126Q96EE4 140 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 NRBF2Q96F24 287 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 GMPPAQ96IJ6 420 aaPredicted RBP3.46□□□□□ -1.86
SCAF11-210ENST00000547654 MS4A14Q96JA4 679 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 C9orf85Q96MD7 179 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 UGT1A10Q9HAW8 530 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 NDE1Q9NXR1 346 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 IFNKQ9P0W0 207 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 CLN8Q9UBY8 286 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 WARS2Q9UGM6 360 aaKnown RBP3.46□□□□□ -1.86
SCAF11-210ENST00000547654 MLXQ9UH92 298 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 ANGPTL2Q9UKU9 493 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 RPL36Q9Y3U8 105 aaKnown RBP3.46□□□□□ -1.86
SCAF11-210ENST00000547654 SMAD5-AS1Q9Y6J3 95 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 METP08581 1390 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 USP47Q96K76 1375 aa3.46□□□□□ -1.86
SCAF11-210ENST00000547654 TNRC6CQ9HCJ0 1690 aaKnown RBP3.46□□□□□ -1.86
SCAF11-210ENST00000547654 NOS1P29475 1434 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 USP6P35125 1406 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 LMTK2Q8IWU2 1503 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 CRYBG1Q9Y4K1 1723 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 A0A1B0GUS0 222 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 ERICH2A1L162 156 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 VSTM2BA6NLU5 285 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 ARHGEF33A8MVX0 844 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 B4DXG7 233 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 SIRPB1O00241 398 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 GOSR2O14653 212 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 SOX15O60248 233 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms