RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 CCDC124Q96CT7 223 aaKnown RBP12.8□□□□□ -0.36
DDX54-203ENST00000546869 BOD1Q96IK1 185 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 LINC00470Q9BZP3 86 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 NDRG3Q9UGV2 375 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 SLC7A8Q9UHI5 535 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 POMPQ9Y244 141 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 PDLIM1O00151 329 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 TRAF3IP2O43734 574 aaPredicted RBP12.79□□□□□ -0.36
DDX54-203ENST00000546869 AKAP8O43823 692 aaKnown RBP12.79□□□□□ -0.36
DDX54-203ENST00000546869 OR6A2O95222 327 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 HPRP00739 348 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 ADAP00813 363 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 ADORA3P0DMS8 318 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 RAP2AP10114 183 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 EPXP11678 715 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 IFI30P13284 250 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 COX5AP20674 150 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 PTNP21246 168 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 EDNRAP25101 427 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 SLC9A3P48764 834 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 C1DQ13901 141 aaKnown RBP12.79□□□□□ -0.36
DDX54-203ENST00000546869 FLOT2Q14254 428 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 GK3PQ14409 553 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 PODNL1Q6PEZ8 512 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 ZNF730Q6ZMV8 503 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 CCDC121Q6ZUS5 278 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 RRM2BQ7LG56 351 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 SSX8Q7RTT4 187 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 NRMQ8IXM6 262 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 KDM8Q8N371 416 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 LRRC17Q8N6Y2 441 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 STEAP2Q8NFT2 490 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 LRR1Q96L50 414 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 SEPHS2Q99611 448 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 ASB6Q9NWX5 421 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 PRSS50Q9UI38 385 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 TMEM5Q9Y2B1 443 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 HIF3AQ9Y2N7 669 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 V9GYQ6 96 aa12.79□□□□□ -0.36
DDX54-203ENST00000546869 TCRBV3S1A0A5B6 114 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 FAM221AA4D161 298 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 NPIPB13A6NJU9 1138 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 NPIPB4C9JG80 1138 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 RPL36A-HNRNPH2H7BZ11 118 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 GADD45GO95257 159 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 CCKARP32238 428 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 LIMS1P48059 325 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 RPS4XP62701 263 aaKnown RBP12.78□□□□□ -0.36
DDX54-203ENST00000546869 LSM11P83369 360 aaKnown RBP eCLIP12.78□□□□□ -0.36
DDX54-203ENST00000546869 EXOC3L2Q2M3D2 409 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 TSPO2Q5TGU0 170 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 ZNF787Q6DD87 383 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 TBPL2Q6SJ96 375 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 CASP12Q6UXS9 341 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 NANOGNBQ7Z5D8 188 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 ABHD12BQ7Z5M8 362 aaPredicted RBP12.78□□□□□ -0.36
DDX54-203ENST00000546869 CXorf67Q86X51 503 aaPredicted RBP12.78□□□□□ -0.36
DDX54-203ENST00000546869 ADGRG5Q8IZF4 528 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 ZNF295-AS1Q8N0V1 137 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 LINC00471Q8N535 108 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 MARVELD3Q96A59 401 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 ADAD1Q96M93 576 aaKnown RBP12.78□□□□□ -0.36
DDX54-203ENST00000546869 SLCO5A1Q9H2Y9 848 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 KRCC1Q9NPI7 259 aaPredicted RBP12.78□□□□□ -0.36
DDX54-203ENST00000546869 CRIM1Q9NZV1 1036 aa12.78□□□□□ -0.36
DDX54-203ENST00000546869 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.78□□□□□ -0.36
DDX54-203ENST00000546869 MPDZO75970 2070 aa12.77□□□□□ -0.36
DDX54-203ENST00000546869 SH3PXD2BA1X283 911 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 BLOC1S5-TXNDC5H3BN57 136 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 PIP5K1CO60331 668 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 SLC43A1O75387 559 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 DIRAS1O95057 198 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 HLA-DOBP13765 273 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 MAKP20794 623 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 IGHV1-2P23083 117 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 AHCYP23526 432 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 SELENOPP49908 381 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 CLDN17P56750 224 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 POU3F1Q03052 451 aaPredicted RBP12.77□□□□□ -0.37
DDX54-203ENST00000546869 FHL1Q13642 323 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 TAF11Q15544 211 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 HIST2H2BCQ6DN03 193 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 OR7E24Q6IFN5 339 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 NIPAL3Q6P499 406 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 P2RY8Q86VZ1 359 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 TMEM123Q8N131 208 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 UBE2J2Q8N2K1 259 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 ZNF433Q8N7K0 673 aaPredicted RBP12.77□□□□□ -0.37
DDX54-203ENST00000546869 PAPD5Q8NDF8 572 aaKnown RBP12.77□□□□□ -0.37
DDX54-203ENST00000546869 OR4K5Q8NGD3 323 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 OR6X1Q8NH79 312 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 LINC01560Q8TB33 94 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 CANT1Q8WVQ1 401 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 WFIKKN1Q96NZ8 548 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 ALPK1Q96QP1 1244 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 SLC7A10Q9NS82 523 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 TAS2R16Q9NYV7 291 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 UPB1Q9UBR1 384 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 TESMINQ9Y4I5 508 aa12.77□□□□□ -0.37
DDX54-203ENST00000546869 TRBV4-1A0A0J9YWV2 114 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms