RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 ZNF367Q7RTV3 350 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 RNF130Q86XS8 419 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 PARP16Q8N5Y8 322 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 KCTD4Q8WVF5 259 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 ASZ1Q8WWH4 475 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 SMPDL3AQ92484 453 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 SLC7A6Q92536 515 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 CIDECQ96AQ7 238 aaPredicted RBP5.93□□□□□ -1.46
CCDC60-205ENST00000546345 ANKRD9Q96BM1 317 aaPredicted RBP5.93□□□□□ -1.46
CCDC60-205ENST00000546345 PDLIM5Q96HC4 596 aaKnown RBP5.93□□□□□ -1.46
CCDC60-205ENST00000546345 ST6GAL2Q96JF0 529 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 EGLN2Q96KS0 407 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 COL21A1Q96P44 957 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 TIMP4Q99727 224 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 DGCR6LQ9BY27 220 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 KRTAP4-2Q9BYR5 136 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 SLCO5A1Q9H2Y9 848 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 EXO5Q9H790 373 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 NT5DC2Q9H857 520 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 GIMAP4Q9NUV9 329 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 ASIC5Q9NY37 505 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 CNOT2Q9NZN8 540 aaKnown RBP5.93□□□□□ -1.46
CCDC60-205ENST00000546345 FAM30AQ9NZY2 134 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 OPTCQ9UBM4 332 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 ZMAT5Q9UDW3 170 aaKnown RBP5.93□□□□□ -1.46
CCDC60-205ENST00000546345 SLC23A1Q9UHI7 598 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 NDRG4Q9ULP0 352 aaKnown RBP5.93□□□□□ -1.46
CCDC60-205ENST00000546345 ASB4Q9Y574 426 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 COMMD10Q9Y6G5 202 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 KCNE2Q9Y6J6 123 aa5.93□□□□□ -1.46
CCDC60-205ENST00000546345 IGHV4-30-2A0A087WSY4 118 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 KCNE1BA0A087WTH5 132 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 IQCMA0A1B0GVH7 501 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.92□□□□□ -1.46
CCDC60-205ENST00000546345 MEIOCA2RUB1 952 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 EFCAB10A6NFE3 127 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 A8MXE2 369 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 AHRRA9YTQ3 701 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 FAM220BPB1ANY3 271 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 DIRC3C9JPN6 131 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 E9PQ18 207 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 WWP2O00308 870 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 CHST10O43529 356 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 GALR3O60755 368 aaPredicted RBP5.92□□□□□ -1.46
CCDC60-205ENST00000546345 ERN1O75460 977 aaKnown RBP5.92□□□□□ -1.46
CCDC60-205ENST00000546345 TNFSF13O75888 250 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 INMTO95050 263 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 WISP3O95389 354 aaPredicted RBP5.92□□□□□ -1.46
CCDC60-205ENST00000546345 IL6P05231 212 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 PKMP14618 531 aaKnown RBP5.92□□□□□ -1.46
CCDC60-205ENST00000546345 GRIA1P42261 906 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 CASP9P55211 416 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 GALK2Q01415 458 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 FAM27E3Q08E93 113 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 PIN1Q13526 163 aaPredicted RBP5.92□□□□□ -1.46
CCDC60-205ENST00000546345 PRAMEF20Q5VT98 475 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 MZT2BQ6NZ67 158 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 HSDL2Q6YN16 418 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 ZNF704Q6ZNC4 412 aaPredicted RBP5.92□□□□□ -1.46
CCDC60-205ENST00000546345 GDPD3Q7L5L3 318 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 ZNF550Q7Z398 422 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 SLC46A3Q7Z3Q1 461 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 PIWIL3Q7Z3Z3 882 aaKnown RBP5.92□□□□□ -1.46
CCDC60-205ENST00000546345 ADCK2Q7Z695 626 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 RDH10Q8IZV5 341 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 GCNT2Q8N0V5 402 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 LIX1Q8N485 282 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 ZNF321PQ8N8H1 164 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 ZNF441Q8N8Z8 693 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 ZNF540Q8NDQ6 660 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 ZNF740Q8NDX6 193 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 OR52K1Q8NGK4 314 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 TWIST2Q8WVJ9 160 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 AP3S1Q92572 193 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 HTRA1Q92743 480 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 TUBGCP3Q96CW5 907 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 TRNT1Q96Q11 434 aaKnown RBP5.92□□□□□ -1.46
CCDC60-205ENST00000546345 TRIB1Q96RU8 372 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 ZBTB18Q99592 522 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 TBL1YQ9BQ87 522 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 SLC39A3Q9BRY0 314 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 SFXN3Q9BWM7 321 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 BEX2Q9BXY8 128 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 ZNF717Q9BY31 904 aaPredicted RBP5.92□□□□□ -1.46
CCDC60-205ENST00000546345 CCDC90BQ9GZT6 254 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 C11orf54Q9H0W9 315 aaPredicted RBP5.92□□□□□ -1.46
CCDC60-205ENST00000546345 RANBP3Q9H6Z4 567 aaPredicted RBP5.92□□□□□ -1.46
CCDC60-205ENST00000546345 ACKR4Q9NPB9 350 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 ZNF275Q9NSD4 429 aaPredicted RBP5.92□□□□□ -1.46
CCDC60-205ENST00000546345 TREX1Q9NSU2 369 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 DCAF13Q9NV06 445 aaKnown RBP5.92□□□□□ -1.46
CCDC60-205ENST00000546345 MED9Q9NWA0 146 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 PIH1D1Q9NWS0 290 aaKnown RBP5.92□□□□□ -1.46
CCDC60-205ENST00000546345 MAT2BQ9NZL9 334 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 RABL2AQ9UBK7 228 aaPredicted RBP5.92□□□□□ -1.46
CCDC60-205ENST00000546345 RPS6KA6Q9UK32 745 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 RABL2BQ9UNT1 228 aa5.92□□□□□ -1.46
CCDC60-205ENST00000546345 RBMX2Q9Y388 322 aaKnown RBP5.92□□□□□ -1.46
CCDC60-205ENST00000546345 DNAJC15Q9Y5T4 150 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms