RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 CAMK2N1Q7Z7J9 78 aa3.42□□□□□ -1.86
COPA-206ENST00000545266 ZNF679Q8IYX0 411 aa3.42□□□□□ -1.86
COPA-206ENST00000545266 GIMAP1Q8WWP7 306 aa3.42□□□□□ -1.86
COPA-206ENST00000545266 LRRC58Q96CX6 371 aa3.42□□□□□ -1.86
COPA-206ENST00000545266 MYCBPQ99417 103 aaPredicted RBP3.42□□□□□ -1.86
COPA-206ENST00000545266 NPY6RQ99463 290 aa3.42□□□□□ -1.86
COPA-206ENST00000545266 POLE4Q9NR33 117 aa3.42□□□□□ -1.86
COPA-206ENST00000545266 KCNIP1Q9NZI2 227 aa3.42□□□□□ -1.86
COPA-206ENST00000545266 TRAPPC4Q9Y296 219 aa3.42□□□□□ -1.86
COPA-206ENST00000545266 RBMY1BA6NDE4 496 aaKnown RBP3.41□□□□□ -1.86
COPA-206ENST00000545266 RBMY1EA6NEQ0 496 aaKnown RBP3.41□□□□□ -1.86
COPA-206ENST00000545266 LAD1O00515 517 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 PEX7O00628 323 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 CXCL11O14625 94 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 ZNF208O43345 1280 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 TIMM8AO60220 97 aaPredicted RBP3.41□□□□□ -1.86
COPA-206ENST00000545266 RBMY1DP0C7P1 496 aaKnown RBP3.41□□□□□ -1.86
COPA-206ENST00000545266 RBMY1A1P0DJD3 496 aaKnown RBP3.41□□□□□ -1.86
COPA-206ENST00000545266 FDFT1P37268 417 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 VHLP40337 213 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 GSSP48637 474 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 PPOXP50336 477 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 ACTR1AP61163 376 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 OGDHQ02218 1023 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 PLD1Q13393 1074 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 ZNF77Q15935 545 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 KCTD19Q17RG1 926 aaPredicted RBP3.41□□□□□ -1.86
COPA-206ENST00000545266 LRRC10Q5BKY1 277 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 ENPP6Q6UWR7 440 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 FNDC5Q8NAU1 212 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 OR4F15Q8NGB8 312 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 FANK1Q8TC84 345 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 MCOLN3Q8TDD5 553 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 CCT7Q99832 543 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 GBA3Q9H227 469 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 CALYQ9NYX4 217 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 BFARQ9NZS9 450 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 TMCC3Q9ULS5 477 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 PIGLQ9Y2B2 252 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 KCNIP3Q9Y2W7 256 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 PDS5BQ9NTI5 1447 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 ATAD2BQ9ULI0 1458 aa3.41□□□□□ -1.86
COPA-206ENST00000545266 PCP4L1A6NKN8 68 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 SURF6O75683 361 aaKnown RBP3.4□□□□□ -1.87
COPA-206ENST00000545266 IL1BP01584 269 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 GIPP09681 153 aaPredicted RBP3.4□□□□□ -1.87
COPA-206ENST00000545266 ABOP16442 354 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 CD1CP29017 333 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 NPBWR2P48146 333 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 SUCLG1P53597 346 aaKnown RBP3.4□□□□□ -1.87
COPA-206ENST00000545266 AIF1P55008 147 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 SCRN3Q0VDG4 424 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 PSG5Q15238 335 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 PIGGQ5H8A4 983 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 KHDRBS2Q5VWX1 349 aaKnown RBP3.4□□□□□ -1.87
COPA-206ENST00000545266 CENPPQ6IPU0 288 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 EFL1Q7Z2Z2 1120 aaKnown RBP3.4□□□□□ -1.87
COPA-206ENST00000545266 PLA2G4DQ86XP0 818 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 ECHDC2Q86YB7 292 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 TBC1D21Q8IYX1 336 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 OR1N2Q8NGR9 330 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 OR2G3Q8NGZ4 309 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 FAM110BQ8TC76 370 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 ACER1Q8TDN7 264 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 PYROXD1Q8WU10 500 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 SLC17A9Q9BYT1 436 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 ANKRD19PQ9H560 264 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 CLEC4AQ9UMR7 237 aa3.4□□□□□ -1.87
COPA-206ENST00000545266 IGLV3-22A0A075B6J6 115 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 IGLV3-16A0A075B6K0 115 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 KIR2DL5BA0A0G2JN68 375 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 KIR2DL5BA0A0G2JPC4 375 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 RIPK2O43353 540 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 ICOSLGO75144 302 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 UPK3AO75631 287 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 YAP1P46937 504 aaKnown RBP3.39□□□□□ -1.87
COPA-206ENST00000545266 NMUP48645 174 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 HERVK_113P61574 105 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 TIFABQ6ZNK6 161 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 KIR2DL5AQ8N109 375 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 DUSP18Q8NEJ0 188 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 KIR2DL5BQ8NHK3 375 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 SMARCD2Q92925 531 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 ZNF641Q96N77 438 aaPredicted RBP3.39□□□□□ -1.87
COPA-206ENST00000545266 RIOK1Q9BRS2 568 aaKnown RBP3.39□□□□□ -1.87
COPA-206ENST00000545266 PELOQ9BRX2 385 aaKnown RBP3.39□□□□□ -1.87
COPA-206ENST00000545266 SLC39A3Q9BRY0 314 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 LRRC40Q9H9A6 602 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 FN3KRPQ9HA64 309 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 EXD2Q9NVH0 621 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 ZNF226Q9NYT6 803 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 ZNF639Q9UID6 485 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 N6AMT1Q9Y5N5 214 aa3.39□□□□□ -1.87
COPA-206ENST00000545266 A0A096LNJ9 63 aa3.38□□□□□ -1.87
COPA-206ENST00000545266 A0A1W2PPV9 198 aa3.38□□□□□ -1.87
COPA-206ENST00000545266 RSPH10B2B2RC85 870 aa3.38□□□□□ -1.87
COPA-206ENST00000545266 B4GALT2O60909 372 aa3.38□□□□□ -1.87
COPA-206ENST00000545266 SS18L1O75177 396 aaPredicted RBP3.38□□□□□ -1.87
COPA-206ENST00000545266 RSPH10BP0C881 870 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms