RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 B3GAT1Q9P2W7 334 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 SEC14L4Q9UDX3 406 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 NUP50Q9UKX7 468 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 RASD1Q9Y272 281 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 A0A1W2PPM1 405 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 CFAP73A6NFT4 308 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 C17orf100A8MU93 164 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 FTCDNL1E5RQL4 147 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 CLDN34H7C241 214 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 PLIN3O60664 434 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 NPIPB7O75200 414 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 CHRNGP07510 517 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 GKN3PP0CG01 181 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 PNMTP11086 282 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 CD79AP11912 226 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 CXCR1P25024 350 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 CRYBB2P43320 205 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 HNRNPA0Q13151 305 aaKnown RBP7.98□□□□□ -1.13
CHD4-212ENST00000545083 GSG1Q2KHT4 349 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 TRMT5Q32P41 509 aaKnown RBP7.98□□□□□ -1.13
CHD4-212ENST00000545083 FBLN7Q53RD9 439 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 XKR7Q5GH72 579 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 MRPL2Q5T653 305 aaKnown RBP7.98□□□□□ -1.13
CHD4-212ENST00000545083 GKAP1Q5VSY0 366 aaPredicted RBP7.98□□□□□ -1.13
CHD4-212ENST00000545083 C1orf140Q5VVS0 124 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 IL23RQ5VWK5 629 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 OR4F3Q6IEY1 312 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 C8orf74Q6P047 294 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 ZCCHC23Q6ZST2 131 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 CCDC36Q8IYA8 594 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 TMEM123Q8N131 208 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 GPR137CQ8N3F9 429 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 ANKFN1Q8N957 763 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 BHLHE22Q8NFJ8 381 aaPredicted RBP7.98□□□□□ -1.13
CHD4-212ENST00000545083 ACMSDQ8TDX5 336 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 SLC25A28Q96A46 364 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 C3orf30Q96M34 536 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 GATA5Q9BWX5 397 aaPredicted RBP7.98□□□□□ -1.13
CHD4-212ENST00000545083 SLC38A1Q9H2H9 487 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 MMP27Q9H306 513 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 PLEK2Q9NYT0 353 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 TAAR3PQ9P1P4 343 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 DCDC2Q9UHG0 476 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 ZNF346Q9UL40 294 aaKnown RBP7.98□□□□□ -1.13
CHD4-212ENST00000545083 RCE1Q9Y256 329 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 MMP24Q9Y5R2 645 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 NOX1Q9Y5S8 564 aa7.98□□□□□ -1.13
CHD4-212ENST00000545083 IGHV1-69-2A0A0G2JMI3 117 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 AGAP5A6NIR3 686 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 A8MVM7 634 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 ZNF99A8MXY4 864 aaPredicted RBP7.97□□□□□ -1.13
CHD4-212ENST00000545083 TRAF3IP2O43734 574 aaPredicted RBP7.97□□□□□ -1.13
CHD4-212ENST00000545083 GLRA3O75311 464 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 SLC43A1O75387 559 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 LYPLA1O75608 230 aaPredicted RBP7.97□□□□□ -1.13
CHD4-212ENST00000545083 AGR2O95994 175 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 MAPK1P28482 360 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 PCGF2P35227 344 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 ACAA2P42765 397 aaKnown RBP7.97□□□□□ -1.13
CHD4-212ENST00000545083 RAD52P43351 418 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 GIPRP48546 466 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 AQP5P55064 265 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 KRTAP10-3P60369 221 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 RPS23P62266 143 aaKnown RBP7.97□□□□□ -1.13
CHD4-212ENST00000545083 CHI3L2Q15782 390 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 SYPL1Q16563 259 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 NKPD1Q17RQ9 610 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 PGS1Q32NB8 556 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 GPAT3Q53EU6 434 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 ARMCX4Q5H9R4 360 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 C6orf136Q5SQH8 315 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 ATAD3BQ5T9A4 648 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 SAXO2Q658L1 398 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 USP51Q70EK9 711 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 SPATC1Q76KD6 591 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 ZNF572Q7Z3I7 529 aaPredicted RBP7.97□□□□□ -1.13
CHD4-212ENST00000545083 RETREG3Q86VR2 466 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 JAZF1Q86VZ6 243 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 CMIPQ8IY22 773 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 KIR3DL3Q8N743 410 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 FGFBP3Q8TAT2 258 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 POP5Q969H6 163 aaKnown RBP7.97□□□□□ -1.13
CHD4-212ENST00000545083 SLC25A36Q96CQ1 311 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 PPP3R2Q96LZ3 170 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 OR2M2Q96R28 347 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 CCT8L2Q96SF2 557 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 FMO2Q99518 471 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 GPA33Q99795 319 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 CITED1Q99966 193 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 PTDSS2Q9BVG9 487 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 HINT3Q9NQE9 182 aaKnown RBP7.97□□□□□ -1.13
CHD4-212ENST00000545083 RLIMQ9NVW2 624 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 LEF1Q9UJU2 399 aaPredicted RBP7.97□□□□□ -1.13
CHD4-212ENST00000545083 MID2Q9UJV3 735 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 DSPPQ9NZW4 1301 aa7.97□□□□□ -1.13
CHD4-212ENST00000545083 IGLV3-9A0A075B6K5 115 aa7.96□□□□□ -1.14
CHD4-212ENST00000545083 CLDN25C9JDP6 229 aa7.96□□□□□ -1.14
CHD4-212ENST00000545083 TRAPPC2LH3BP13 241 aa7.96□□□□□ -1.14
CHD4-212ENST00000545083 M0R3G1 203 aa7.96□□□□□ -1.14
CHD4-212ENST00000545083 HMGN4O00479 90 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms