RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 BMP2P12643 396 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 MYF5P13349 255 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 CXCR4P61073 352 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC10A1Q14973 349 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 MOGQ16653 247 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 UGT8Q16880 541 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 COL13A1Q5TAT6 717 aaPredicted RBP6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 PLCXD3Q63HM9 321 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 THSD4Q6ZMP0 1018 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 MARCH3Q86UD3 253 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 SMRP1Q8NCR6 262 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 OR5D14Q8NGL3 314 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF417Q8TAU3 575 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 APH1AQ96BI3 265 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 FOXN4Q96NZ1 517 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 TECTBQ96PL2 329 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 LMF1Q96S06 567 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 KATNB1Q9BVA0 655 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 KLHL9Q9P2J3 617 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 STUB1Q9UNE7 303 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 YARS2Q9Y2Z4 477 aaKnown RBP6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 UBE2J1Q9Y385 318 aaPredicted RBP6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 H7C417 338 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 SURF4O15260 269 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 CSF2P04141 144 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 SERPINA5P05154 406 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 DBHP09172 617 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 CD22P20273 847 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 TRA2AQ13595 282 aaKnown RBP eCLIP6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 PGGHGQ32M88 737 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF750Q32MQ0 723 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 PROX2Q3B8N5 592 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 OR7E24Q6IFN5 339 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 BAIAP2L2Q6UXY1 529 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 DPY19L4Q7Z388 723 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 CMIPQ8IY22 773 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 ZFP82Q8N141 532 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 POC1BQ8TC44 478 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 NEURL3Q96EH8 262 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 A8MVM7 634 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF814B7Z6K7 855 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 KLF4O43474 513 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 FKBP2P26885 142 aaKnown RBP6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 WNT4P56705 351 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 MS4A2Q01362 244 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 FAM53BQ14153 422 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 TRIP6Q15654 476 aaKnown RBP6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 GALNT11Q8NCW6 608 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 OR51T1Q8NGJ9 327 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 OR13C2Q8NGS9 318 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 PIGCQ92535 297 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 C12orf43Q96C57 262 aaKnown RBP6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 TXNDC15Q96J42 360 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 DEFB127Q9H1M4 99 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 MMP27Q9H306 513 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 DUSP22Q9NRW4 184 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 POMT2Q9UKY4 750 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 IGHV1OR15-9A0A0B4J2B8 117 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 A0A1B0GVC2 190 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 A0A1B0GWA3 101 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 EIF4E2O60573 245 aaKnown RBP6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 STK17BO94768 372 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 TXNDC12O95881 172 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 ARNTP27540 789 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 ATP1B3P54709 279 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 RAC1P63000 192 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 RELQ04864 619 aaPredicted RBP6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 SCGB2A2Q13296 93 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 FAM71E1Q6IPT2 247 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 XKRXQ6PP77 449 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 TMEM92Q6UXU6 159 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 ELMOD2Q8IZ81 293 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 ZC3HAV1LQ96H79 300 aaKnown RBP6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 PKMYT1Q99640 499 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 CPPED1Q9BRF8 314 aaPredicted RBP6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC6A15Q9H2J7 730 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 FXYD6-FXYD2A0A087WZ82 144 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 FAM183AA6NL82 134 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 FZD6O60353 706 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 HLCSP50747 726 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 BIDP55957 195 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 RAB4BP61018 213 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 RBM39Q14498 530 aaKnown RBP6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 GNMTQ14749 295 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 LEXMQ3ZCV2 418 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 UGT2A3Q6UWM9 527 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 CLEC9AQ6UXN8 241 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 GRINAQ7Z429 371 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 B3GNT7Q8NFL0 401 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 LINC00615Q96LM1 132 aaPredicted RBP6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 STACQ99469 402 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 FXYD6Q9H0Q3 95 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 C1orf198Q9H425 327 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 FBXL3Q9UKT7 428 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 FBLL1A6NHQ2 334 aaKnown RBP6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 SYT5O00445 386 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 SHOXO15266 292 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 KIAA0513O60268 411 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 SFTPBP07988 381 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 ZGLP1P0C6A0 271 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms