RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 ELP2Q6IA86 826 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 HIST3H2AQ7L7L0 130 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 HSD17B13Q7Z5P4 300 aaPredicted RBP8.36□□□□□ -1.07
THBS3-211ENST00000541990 GID4Q8IVV7 300 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 ZNF433Q8N7K0 673 aaPredicted RBP8.36□□□□□ -1.07
THBS3-211ENST00000541990 OR4D10Q8NGI6 311 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 OR51A7Q8NH64 312 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 HIST1H2ACQ93077 130 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 UBE2E3Q969T4 207 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 ZMYND19Q96E35 227 aaPredicted RBP8.36□□□□□ -1.07
THBS3-211ENST00000541990 OR2A7Q96R45 310 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 ZNF559Q9BR84 538 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 LRRC61Q9BV99 259 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 IFT27Q9BW83 186 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 FN3KQ9H479 309 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 SCPEP1Q9HB40 452 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 PRDM9Q9NQV7 894 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 APOBEC3BQ9UH17 382 aaKnown RBP8.36□□□□□ -1.07
THBS3-211ENST00000541990 SPTY2D1-AS1A0A0U1RR47 76 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 A0A1B0GVT2 93 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 UNC119BA6NIH7 251 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 PRAMEF26H0Y7S4 382 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 H3BSH0 61 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 CREBL2O60519 120 aaPredicted RBP8.36□□□□□ -1.07
THBS3-211ENST00000541990 HPP00738 406 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 HMGN1P05114 100 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 SAGP10523 405 aaPredicted RBP8.36□□□□□ -1.07
THBS3-211ENST00000541990 PPP3CBP16298 524 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 PTH2RP49190 550 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 STARD6P59095 220 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 FOXK2Q01167 660 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 TGM3Q08188 693 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 MAPK14Q16539 360 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 TMEM44Q2T9K0 475 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 SLC6A19Q695T7 634 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 FAM111BQ6SJ93 734 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 LCTLQ6UWM7 567 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 LURAP1LQ8IV03 231 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 SPICQ8N5J4 248 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 ZCCHC10Q8TBK6 192 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 ZNRF4Q8WWF5 429 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 PELI1Q96FA3 418 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 WDR13Q9H1Z4 485 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 RHBGQ9H310 441 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 ZNF768Q9H5H4 540 aaKnown RBP8.36□□□□□ -1.07
THBS3-211ENST00000541990 NOX4Q9NPH5 578 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 SIDT1Q9NXL6 827 aaKnown RBP8.36□□□□□ -1.07
THBS3-211ENST00000541990 ABRACLQ9P1F3 81 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 WNT16Q9UBV4 365 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 ERVK-19Q9WJR5 959 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 FANCMQ8IYD8 2048 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 COL4A2P08572 1712 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 K7ESF4 209 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 PPP1R3DO95685 299 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 BCL6P41182 706 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 DHPSP49366 369 aaPredicted RBP8.35□□□□□ -1.07
THBS3-211ENST00000541990 P2RX1P51575 399 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 AKR1C2P52895 323 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 NRG3P56975 720 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 FOXL2P58012 376 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 RAP2BP61225 183 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 SORDQ00796 357 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 AKR1C1Q04828 323 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 ILF3Q12906 894 aaKnown RBP eCLIP8.35□□□□□ -1.07
THBS3-211ENST00000541990 UBE2NLQ5JXB2 153 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 PRAMEF17Q5VTA0 474 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 ZNF836Q6ZNA1 936 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 USP53Q70EK8 1073 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 PRSS41Q7RTY9 318 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 CDH26Q8IXH8 852 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 PDZD9Q8IXQ8 264 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 SLC16A11Q8NCK7 471 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 OR5M9Q8NGP3 310 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 ELP4Q96EB1 424 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 C12orf57Q99622 126 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 SRMSQ9H3Y6 488 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 KLF2Q9Y5W3 355 aaPredicted RBP8.35□□□□□ -1.07
THBS3-211ENST00000541990 CNOT1A5YKK6 2376 aaKnown RBP8.35□□□□□ -1.07
THBS3-211ENST00000541990 LOC400499M0QZD8 3231 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 KNTC1P50748 2209 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 MEIS3P1A6NDR6 274 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 GPR31O00270 319 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 SYT5O00445 386 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 CTDSPLO15194 276 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 PRAF2O60831 178 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 KRT33AO76009 404 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 AIFM1O95831 613 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 RAB28P51157 221 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 ZNF136P52737 540 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 CSNK1G2P78368 415 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 PRR5P85299 388 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 PDSS1Q5T2R2 415 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 FAM69AQ5T7M9 428 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 YOD1Q5VVQ6 348 aaPredicted RBP8.35□□□□□ -1.07
THBS3-211ENST00000541990 OR4C11Q6IEV9 310 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 METTL27Q8N6F8 245 aaPredicted RBP8.35□□□□□ -1.07
THBS3-211ENST00000541990 DNAAF1Q8NEP3 725 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 NUP43Q8NFH3 380 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 BPIFCQ8NFQ6 507 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 ASB12Q8WXK4 309 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms