RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 C20orf144Q9BQM9 153 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 MED10Q9BTT4 135 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 RSRP1Q9BUV0 290 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 TRMT61BQ9BVS5 477 aaKnown RBP4.79□□□□□ -1.64
SNHG1-218ENST00000541615 TPPP3Q9BW30 176 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 ELOVL1Q9BW60 279 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 SSBP4Q9BWG4 385 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-218ENST00000541615 OR2J1Q9GZK6 312 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 PORCNQ9H237 461 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 CPVLQ9H3G5 476 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 ST6GALNAC4Q9H4F1 302 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 RAB6BQ9NRW1 208 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 DCAF13Q9NV06 445 aaKnown RBP4.79□□□□□ -1.64
SNHG1-218ENST00000541615 TMEM140Q9NV12 185 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 RBM22Q9NW64 420 aaKnown RBP eCLIP4.79□□□□□ -1.641e-8■■■□□ 18.1
SNHG1-218ENST00000541615 DMAC2Q9NW81 257 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 TXNL4BQ9NX01 149 aaKnown RBP4.79□□□□□ -1.64
SNHG1-218ENST00000541615 TMEM161AQ9NX61 479 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 IL17CQ9P0M4 197 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 PIPOXQ9P0Z9 390 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 VPS29Q9UBQ0 182 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 AJAP1Q9UKB5 411 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-218ENST00000541615 EXO1Q9UQ84 846 aaKnown RBP4.79□□□□□ -1.64
SNHG1-218ENST00000541615 EXOSC1Q9Y3B2 195 aaKnown RBP4.79□□□□□ -1.64
SNHG1-218ENST00000541615 ZNF337Q9Y3M9 751 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 RPL36Q9Y3U8 105 aaKnown RBP4.79□□□□□ -1.64
SNHG1-218ENST00000541615 ARL5AQ9Y689 179 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 NWD2Q9ULI1 1742 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 TOPAZ1Q8N9V7 1692 aa4.79□□□□□ -1.64
SNHG1-218ENST00000541615 CHD5Q8TDI0 1954 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 OTOFQ9HC10 1997 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 FXYD6-FXYD2A0A087WZ82 144 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 LOC105369274A0A096LPK9 316 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 IGHV2-70DA0A0C4DH43 119 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 TRDV1A0A1B0GX56 115 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 A0A1W2PNV4 684 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 A0A1W2PRV1 198 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 ANKRD20A5PA0PJZ0 165 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 ELOVL7A1L3X0 281 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 C7orf77A4D0Y5 90 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 ANKRD61A6NGH8 418 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 NEURL1BA8MQ27 555 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 OR11H12B2RN74 326 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 PIP5K1BO14986 540 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 ZNF264O43296 627 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 GPR37L1O60883 481 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 ENTPD6O75354 484 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 RBMXL2O75526 392 aaKnown RBP4.78□□□□□ -1.64
SNHG1-218ENST00000541615 UBL3O95164 117 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 VAMP5O95183 116 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 SYNGR4O95473 234 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 LSM8O95777 96 aaKnown RBP4.78□□□□□ -1.64
SNHG1-218ENST00000541615 WNT11O96014 354 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 HPRT1P00492 218 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 CST4P01036 141 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 PDGFBP01127 241 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-218ENST00000541615 PTHP01270 115 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 THY1P04216 161 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 CD5P06127 495 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 SFTA3P0C7M3 94 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 ALPPL2P10696 532 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 TDGF1P13385 188 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 POU3F2P20265 443 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-218ENST00000541615 DPP4P27487 766 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 CHRNB4P30926 498 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 GABRA5P31644 462 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 FAUP35544 74 aaKnown RBP4.78□□□□□ -1.64
SNHG1-218ENST00000541615 SNCAP37840 140 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 RPL3P39023 403 aaKnown RBP4.78□□□□□ -1.64
SNHG1-218ENST00000541615 RPS10P46783 165 aaKnown RBP4.78□□□□□ -1.64
SNHG1-218ENST00000541615 MTNR1BP49286 362 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 SELENOPP49908 381 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 SMSP52788 366 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 AKR1C2P52895 323 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 ART1P52961 327 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 PNLIPRP2P54317 469 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 GEMP55040 296 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 F2RL1P55085 397 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 CDH12P55289 794 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 ZP1P60852 638 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 YPEL5P62699 121 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 SSBP2P81877 361 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-218ENST00000541615 FABP5Q01469 135 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 PAX5Q02548 391 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 MXD1Q05195 221 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 CAMK2GQ13555 558 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-218ENST00000541615 RCAN2Q14206 197 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 ZNF235Q14590 738 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 EBPQ15125 230 aaKnown RBP4.78□□□□□ -1.64
SNHG1-218ENST00000541615 SSX1Q16384 188 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 UGCGQ16739 394 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 SOWAHAQ2M3V2 549 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 Q5PR19 223 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 OR2G6Q5TZ20 316 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 OTUD1Q5VV17 481 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-218ENST00000541615 CARD17Q5XLA6 110 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 ZNF626Q68DY1 528 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 OVOS1Q6IE37 1185 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 GJB7Q6PEY0 223 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 TRMT10BQ6PF06 316 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms