RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CSNK1A1LQ8N752 337 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 DRAXINQ8NBI3 349 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-217ENST00000541578 PRSS33Q8NF86 280 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 CCDC148Q8NFR7 591 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 CCDC26Q8TAB7 109 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 MIPOL1Q8TD10 442 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 RAPGEF5Q92565 580 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 GTF3AQ92664 365 aaKnown RBP3.38□□□□□ -1.87
SNHG1-217ENST00000541578 STMN2Q93045 179 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 ZBED6CLQ96FA7 236 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-217ENST00000541578 PIWIL1Q96J94 861 aaKnown RBP3.38□□□□□ -1.87
SNHG1-217ENST00000541578 TGS1Q96RS0 853 aaKnown RBP3.38□□□□□ -1.87
SNHG1-217ENST00000541578 CHP1Q99653 195 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 SLC35A5Q9BS91 424 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 NIPSNAP3BQ9BS92 247 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 NAT10Q9H0A0 1025 aaKnown RBP3.38□□□□□ -1.87
SNHG1-217ENST00000541578 EXO5Q9H790 373 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 NEK6Q9HC98 313 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 MEPEQ9NQ76 525 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-217ENST00000541578 NUDT15Q9NV35 164 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 IMPAD1Q9NX62 359 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 PSMC3IPQ9P2W1 217 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-217ENST00000541578 ABCG2Q9UNQ0 655 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 RASD1Q9Y272 281 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 POLDIP2Q9Y2S7 368 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 PPIAL4AQ9Y536 164 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 N6AMT1Q9Y5N5 214 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 RIF1Q5UIP0 2472 aaKnown RBP3.38□□□□□ -1.87
SNHG1-217ENST00000541578 WDR87Q6ZQQ6 2873 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 SIP14410 1827 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 A0A0G2JMZ2 1700 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 A0A087X002 238 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 CCDC182A6NF36 153 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 RPL37AP8A6NKH3 93 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 TCP11X1B4DZS4 312 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 E9PAM4 449 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 H0YIV9 168 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 KIF2AO00139 706 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-217ENST00000541578 ABCD4O14678 606 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 OR10H3O60404 316 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 HPP00738 406 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 CD55P08174 381 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 HCKP08631 526 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 IDSP22304 550 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 PKNOX1P55347 436 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 CCL23P55773 120 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 RGS8P57771 180 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-217ENST00000541578 OC90Q02509 493 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-217ENST00000541578 MECOMQ03112 1051 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 C1orf61Q13536 156 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 KCNJ11Q14654 390 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 BCL7AQ4VC05 210 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 C9orf66Q5T8R8 295 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 LIPNQ5VXI9 398 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 CCDC137Q6PK04 289 aaKnown RBP3.37□□□□□ -1.87
SNHG1-217ENST00000541578 ANGPTL8Q6UXH0 198 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 LRRC74BQ6ZQY2 392 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 EIF3MQ7L2H7 374 aaKnown RBP3.37□□□□□ -1.87
SNHG1-217ENST00000541578 NRMQ8IXM6 262 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 CADM2Q8N3J6 435 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 ALLCQ8N6M5 410 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 OR4D9Q8NGE8 314 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 VN1R17PQ8TDU5 208 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 LINC00479Q96M42 142 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 GSDMAQ96QA5 445 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 SYT11Q9BT88 431 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 LRRC61Q9BV99 259 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 TRIM62Q9BVG3 475 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 ELOVL4Q9GZR5 314 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 SMYD3Q9H7B4 428 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 POPDC2Q9HBU9 364 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 ZMAT5Q9UDW3 170 aaKnown RBP3.37□□□□□ -1.87
SNHG1-217ENST00000541578 PHF11Q9UIL8 331 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 KIAA1257Q9ULG3 409 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 PRSS21Q9Y6M0 314 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 MCM3APO60318 1980 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 WDR19Q8NEZ3 1342 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 ROBO3Q96MS0 1386 aa3.37□□□□□ -1.87
SNHG1-217ENST00000541578 FOCADQ5VW36 1801 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 IGKV3D-20A0A0C4DH25 116 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 SMIM28A0A1B0GU29 152 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 MEX3AA1L020 520 aaKnown RBP3.36□□□□□ -1.87
SNHG1-217ENST00000541578 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 NCF1BA6NI72 391 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-217ENST00000541578 NCF1CA8MVU1 366 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-217ENST00000541578 B4DXG7 233 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 TRDCB7Z8K6 153 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 PRKYO43930 277 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 HCN1O60741 890 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 PFKFB2O60825 505 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 DNAJB6O75190 326 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 CDH16O75309 829 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 SH3BGRLO75368 114 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 CNMDO75829 334 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 FLOT1O75955 427 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 ZFAND5O76080 213 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 POLR2EP19388 210 aaKnown RBP3.36□□□□□ -1.87
SNHG1-217ENST00000541578 CCT6AP40227 531 aaKnown RBP3.36□□□□□ -1.87
SNHG1-217ENST00000541578 GSK3BP49841 420 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 DAP3P51398 398 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms