RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, human

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-210	ENST00000540975	PPIL2	Q13356	520 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	CHRNA6	Q15825	494 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	TPD52L1	Q16890	204 aa	Predicted RBP	3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	ZNF630	Q2M218	657 aa	Predicted RBP	3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	SAPCD1	Q5SSQ6	148 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	PTRHD1	Q6GMV3	140 aa	Known RBP	3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	METAP1D	Q6UB28	335 aa	Predicted RBP	3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	TAS2R42	Q7RTR8	314 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	LRRC70	Q7Z2Q7	622 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	FAM228A	Q86W67	206 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	ARHGAP18	Q8N392	663 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	ZCCHC7	Q8N3Z6	543 aa	Known RBP	3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	RNF148	Q8N7C7	305 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	STKLD1	Q8NE28	680 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	OR2AP1	Q8NGE2	309 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	CCDC12	Q8WUD4	166 aa	Predicted RBP	3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	PDCD6IP	Q8WUM4	868 aa	Known RBP	3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	DCUN1D4	Q92564	292 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	RAD51AP1	Q96B01	352 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	FEM1A	Q9BSK4	669 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	BBS2	Q9BXC9	721 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	POLR3F	Q9H1D9	316 aa	Predicted RBP	3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	GBA3	Q9H227	469 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	LPAR2	Q9HBW0	351 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	ZNF331	Q9NQX6	463 aa	Predicted RBP	3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	DAZ3	Q9NR90	486 aa	Known RBP	3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	INIP	Q9NRY2	104 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	RAB20	Q9NX57	234 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	UNC13B	O14795	1591 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	ABCC3	O15438	1527 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	ARAP3	Q8WWN8	1544 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	SHPRH	Q149N8	1683 aa		3.75	□□□□□ -1.81
YBX3-210	ENST00000540975	UBE4B	O95155	1302 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975		A0A0J9YXY3	114 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	SMIM28	A0A1B0GU29	152 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	TMEM120B	A0PK00	339 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	FAM47DP	A6NHR8	397 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	GOLGA8K	D6RF30	607 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	GATC	O43716	136 aa	Known RBP	3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	ADGRB2	O60241	1585 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	DIRAS3	O95661	229 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	CSTA	P01040	98 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	KRT7	P08729	469 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	CLTA	P09496	248 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	CCDC130	P13994	396 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	EIF2S2	P20042	333 aa	Known RBP	3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	M6PR	P20645	277 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	CPN2	P22792	545 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	PSMA2	P25787	234 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	CD1B	P29016	333 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	NTS	P30990	170 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	PSMC5	P62195	406 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	UBE2H	P62256	183 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	CPSF1	Q10570	1443 aa	Known RBP	3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	ST3GAL3	Q11203	375 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	IL24	Q13007	206 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	DDX39B	Q13838	428 aa	Known RBP	3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	EXOSC2	Q13868	293 aa	Known RBP	3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	C10orf120	Q5SQS8	335 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	BLOC1S2	Q6QNY1	142 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	RBM43	Q6ZSC3	357 aa	Known RBP	3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	TPGS1	Q6ZTW0	290 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	C3orf62	Q6ZUJ4	267 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	CLVS1	Q8IUQ0	354 aa	Predicted RBP	3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	CSGALNACT2	Q8N6G5	542 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	CEP112	Q8N8E3	955 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	MINDY2	Q8NBR6	621 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	SPATA4	Q8NEY3	305 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	OR13C2	Q8NGS9	318 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	OR10Z1	Q8NGY1	313 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	RAB3IL1	Q8TBN0	382 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	FANK1	Q8TC84	345 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	SLC13A3	Q8WWT9	602 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	IL22RA2	Q969J5	263 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	UPRT	Q96BW1	309 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	CYTH2	Q99418	400 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	SLC29A1	Q99808	456 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	AGPAT5	Q9NUQ2	364 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	RHBDL2	Q9NX52	303 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	CRLS1	Q9UJA2	301 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	RAB26	Q9ULW5	256 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	SLC22A14	Q9Y267	594 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	PPIL1	Q9Y3C6	166 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	EFCAB6	Q5THR3	1501 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	ASXL1	Q8IXJ9	1541 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	CPD	O75976	1380 aa		3.74	□□□□□ -1.81
YBX3-210	ENST00000540975	PTPRT	O14522	1441 aa		3.73	□□□□□ -1.81
YBX3-210	ENST00000540975	PLCH2	O75038	1416 aa		3.73	□□□□□ -1.81
YBX3-210	ENST00000540975	SSH2	Q76I76	1423 aa		3.73	□□□□□ -1.81
YBX3-210	ENST00000540975	TUBGCP6	Q96RT7	1819 aa		3.73	□□□□□ -1.81
YBX3-210	ENST00000540975		A0A1B0GTQ1	180 aa		3.73	□□□□□ -1.81
YBX3-210	ENST00000540975	TMEM210	A6NLX4	147 aa		3.73	□□□□□ -1.81
YBX3-210	ENST00000540975	IQCF5	A8MTL0	148 aa		3.73	□□□□□ -1.81
YBX3-210	ENST00000540975	ANGPT2	O15123	496 aa		3.73	□□□□□ -1.81
YBX3-210	ENST00000540975	EFNA2	O43921	213 aa		3.73	□□□□□ -1.81
YBX3-210	ENST00000540975	GMFG	O60234	142 aa		3.73	□□□□□ -1.81
YBX3-210	ENST00000540975	MGRN1	O60291	552 aa		3.73	□□□□□ -1.81
YBX3-210	ENST00000540975	STX10	O60499	249 aa		3.73	□□□□□ -1.81

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