RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 RPRD1BQ9NQG5 326 aaKnown RBP11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 HPF1Q9NWY4 346 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 ZMIZ1Q9ULJ6 1067 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 COPS3Q9UNS2 423 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 RPH3AQ9Y2J0 694 aaPredicted RBP11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 SLC6A5Q9Y345 797 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 SF3B6Q9Y3B4 125 aaKnown RBP11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 MED13Q9UHV7 2174 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 A0A1W2PNR3 127 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 A0A1W2PQL4 384 aaPredicted RBP11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 PRR32B1ATL7 298 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 ZNF814B7Z6K7 855 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 E9PI62 339 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 MS4A18H0YCH9 400 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 STMND1H3BQB6 276 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 SLC22A1O15245 554 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 MT-ATP6P00846 226 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 PSKH1P11801 424 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 CDK4P11802 303 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 DNASE1L1P49184 302 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 MELKQ14680 651 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 MS4A18Q3C1V0 323 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 SLC22A10Q63ZE4 541 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 TMEM81Q6P7N7 255 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 ZNF322Q6U7Q0 402 aaPredicted RBP11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 PLCZ1Q86YW0 608 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 KLBQ86Z14 1044 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 ZNF511Q8NB15 262 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 PSD4Q8NDX1 1056 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 TMEM203Q969S6 136 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 ALG8Q9BVK2 526 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 DCSTAMPQ9H295 470 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 SDHAF3Q9NRP4 125 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 NDUFB11Q9NX14 153 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 HAO2Q9NYQ3 351 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 PCDHGB6Q9Y5F9 930 aa11.05□□□□□ -0.64
AP003559.1-201ENST00000540906 PINLYPA6NC86 204 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 LIPT2A6NK58 231 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 DVL2O14641 736 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 SNPHO15079 494 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 RNF13O43567 381 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 IDH3BO43837 385 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 TFPIP10646 304 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 APEHP13798 732 aaKnown RBP11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 LIFP15018 202 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 CPEP16870 476 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 PAICSP22234 425 aaKnown RBP11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 AHCYP23526 432 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 CLK1P49759 484 aaKnown RBP11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 DIO1P49895 249 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 SNTA1Q13424 505 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 INSL4Q14641 139 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 ACKR1Q16570 336 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 ACER2Q5QJU3 275 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 KLHL36Q8N4N3 616 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 ACBD7Q8N6N7 88 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 ZNF519Q8TB69 540 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 ZFAND2BQ8WV99 257 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 ADAMTS14Q8WXS8 1223 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 MRGPRX4Q96LA9 322 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 JSRP1Q96MG2 331 aaPredicted RBP11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 FOXN4Q96NZ1 517 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 TM9SF2Q99805 663 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 ASPNQ9BXN1 380 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 INIPQ9NRY2 104 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 DEPPQ9NTK1 212 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 CHCHD3Q9NX63 227 aaKnown RBP11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 MRPL39Q9NYK5 338 aaKnown RBP11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 GRHPRQ9UBQ7 328 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 FREM3P0C091 2139 aa11.04□□□□□ -0.64
AP003559.1-201ENST00000540906 DAPL1A0PJW8 107 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 CDRT15L2A8MXV6 281 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 TM4SF5O14894 197 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 ARHGEF9O43307 516 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 ZNF208O43345 1280 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 ZIC3O60481 467 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 AKR7A3O95154 331 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 INHBBP09529 407 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 ENTPD1P49961 510 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 GPR85P60893 370 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 MYBPHQ13203 477 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 TPBGQ13641 420 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 GGTLC2Q14390 218 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 JAZF1Q86VZ6 243 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 PM20D2Q8IYS1 436 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 OR6V1Q8N148 313 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 OR6K6Q8NGW6 343 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 OR52N1Q8NH53 320 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 ZHX1-C8orf76Q96EF9 292 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 SLIRPQ9GZT3 109 aaKnown RBP11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 SRA1Q9HD15 236 aaKnown RBP11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 ASCL3Q9NQ33 180 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 KLHDC2Q9Y2U9 406 aa11.03□□□□□ -0.64
AP003559.1-201ENST00000540906 TVP23AA6NH52 213 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 LRRC3CA6NJW4 275 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 RAMP1O60894 148 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 TRIM3O75382 744 aaPredicted RBP11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 RFPL3SP0C7P2 107 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 ICAM2P13598 275 aa11.02□□□□□ -0.64
AP003559.1-201ENST00000540906 IDUAP35475 653 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms