RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 DEF8Q6ZN54 512 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 TMPPEQ6ZT21 453 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 FAM214BQ7L5A3 538 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 KRT73Q86Y46 540 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 RBM45Q8IUH3 476 aaKnown RBP7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 ARMC8Q8IUR7 673 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 LSMEM1Q8N8F7 131 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 ZNF418Q8TF45 676 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 NEUROG1Q92886 237 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 TAMM41Q96BW9 452 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 CMTM5Q96DZ9 223 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 DNAJA3Q96EY1 480 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 REXO5Q96IC2 774 aaKnown RBP7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 LRRC37BQ96QE4 947 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 ZNF607Q96SK3 696 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 SPATA5L1Q9BVQ7 753 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 TRIM2Q9C040 744 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 OR11A1Q9GZK7 315 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 ACTR6Q9GZN1 396 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 SERINC1Q9NRX5 453 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 CHRNA9Q9UGM1 479 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 PRDM4Q9UKN5 801 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 ANGPT4Q9Y264 503 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 TMED7Q9Y3B3 224 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 ZNF175Q9Y473 711 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 PCDHGB1Q9Y5G3 927 aa7.78□□□□□ -1.16
TRAPPC1-202ENST00000540486 CADP27708 2225 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 ELOVL7A1L3X0 281 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 FAM220BPB1ANY3 271 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 NDUFS8O00217 210 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 RGS9O75916 674 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 T-ENOLP0DO92 83 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 IMPDH2P12268 514 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 PSMB1P20618 241 aaKnown RBP7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 ME2P23368 584 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 KDELR2P33947 212 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 HTR3AP46098 478 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 LIMS1P48059 325 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 DIO1P49895 249 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 NUDT2P50583 147 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 POLR2HP52434 150 aaKnown RBP7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 SLC7A2P52569 658 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 RAC3P60763 192 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 PSME3P61289 254 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 EGR4Q05215 589 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 LIPEQ05469 1076 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 BNIP2Q12982 314 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 NPTX1Q15818 432 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 ZNF239Q16600 458 aaKnown RBP7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 SYT14P1Q58G82 188 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 PDSS1Q5T2R2 415 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 GKAP1Q5VSY0 366 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 WBP2NLQ6ICG8 309 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 C3orf33Q6P1S2 294 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 BEND4Q6ZU67 534 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 PATL1Q86TB9 770 aaKnown RBP7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 ATG4DQ86TL0 474 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 TSPYL5Q86VY4 417 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 SLC30A8Q8IWU4 369 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 MICU2Q8IYU8 434 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 CADM2Q8N3J6 435 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 STEAP2Q8NFT2 490 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 OR2T12Q8NG77 320 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 OR6T1Q8NGN1 323 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 C3orf49Q96BT1 292 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 OR5B2Q96R09 309 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 ARHGDIGQ99819 225 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 CACNG6Q9BXT2 260 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 HDHD5Q9BXW7 423 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 ARMC7Q9H6L4 198 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 PAQR5Q9NXK6 330 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 TMEM181Q9P2C4 612 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 TAGLN3Q9UI15 199 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 ING1Q9UK53 422 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 CLEC4AQ9UMR7 237 aa7.77□□□□□ -1.17
TRAPPC1-202ENST00000540486 IGHV3-15A0A0B4J1V0 119 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 PRORSD1PA6NEY8 169 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 A6NHS1 94 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 GJE1A6NN92 205 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 VWC2LB2RUY7 222 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 ZNF814B7Z6K7 855 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 M0R3H8 397 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 SULT2B1O00204 365 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 SMAD9O15198 467 aaKnown RBP7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 ZNF208O43345 1280 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 RAMP1O60894 148 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 NPIPB7O75200 414 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 DCTN3O75935 186 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 SYNGR4O95473 234 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 THY1P04216 161 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 TFPIP10646 304 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 FKBP2P26885 142 aaKnown RBP7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 SLC7A1P30825 629 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 NTF4P34130 210 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 CLK1P49759 484 aaKnown RBP7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 GSK3BP49841 420 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 COPZ1P61923 177 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 H3F3AP84243 136 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 SLC25A3Q00325 362 aa7.76□□□□□ -1.17
TRAPPC1-202ENST00000540486 GGTLC2Q14390 218 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms