RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 DND1Q8IYX4 353 aaKnown RBP12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 OR5M9Q8NGP3 310 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 GAL3ST3Q96A11 431 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 PBX4Q9BYU1 374 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 WDR13Q9H1Z4 485 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 SAV1Q9H4B6 383 aaPredicted RBP12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 DEC1Q9P2X7 70 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 MPDZO75970 2070 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 TMEM72A0PK05 275 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 SNRPGP15A8MWD9 76 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 IL5P05113 134 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 CSF2RAP15509 400 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 DIO1P49895 249 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 B3GNTL1Q67FW5 361 aaPredicted RBP12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 ELP2Q6IA86 826 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 SP7Q8TDD2 431 aaPredicted RBP12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 TNFAIP8L1Q8WVP5 186 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 MIB2Q96AX9 1013 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 NPAS1Q99742 590 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 MFRPQ9BY79 579 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 MFFQ9GZY8 342 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 TCF7L1Q9HCS4 588 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 DAPP1Q9UN19 280 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 SLC27A6Q9Y2P4 619 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 BRINP1O60477 761 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 HPP00738 406 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 EGFP01133 1207 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 CEACAM5P06731 702 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 LINC00271P0C7V0 271 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 DDX6P26196 483 aaKnown RBP eCLIP12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 NNATQ16517 81 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 BEX5Q5H9J7 111 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 KIRREL2Q6UWL6 708 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 POMGNT2Q8NAT1 580 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 WFIKKN2Q8TEU8 576 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 DUSP19Q8WTR2 217 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 SUSD6Q92537 303 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 LRRC46Q96FV0 321 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 MED11Q9P086 117 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 FRRS1LQ9P0K9 344 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 NDUFA2O43678 99 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 RASGRP1O95267 797 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 IGKV1D-16P01601 117 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 PPM1AP35813 382 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 LTBQ06643 244 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 AGBL4Q5VU57 503 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 OR10Z1Q8NGY1 313 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 FGF13Q92913 245 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 UTP23Q9BRU9 249 aaKnown RBP12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 ZNF416Q9BWM5 594 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 ENTPD2Q9Y5L3 495 aa12.72□□□□□ -0.37
SCNN1A-215ENST00000540037 A0A1W2PP55 124 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 UBE2QL1A1L167 161 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 HMSDA8MTL9 139 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 H7C1C5 153 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 PRKNO60260 465 aaPredicted RBP12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 RAD1O60671 282 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 CTNSO60931 367 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 GLSO94925 669 aaPredicted RBP12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 NDUFB2O95178 105 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 GPANK1O95872 356 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 ADH1CP00326 375 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 CALCRP30988 508 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 LCN6P62502 163 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 UBXN2BQ14CS0 331 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 RBMS2Q15434 407 aaKnown RBP12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 C4orf46Q504U0 113 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 TSSK4Q6SA08 328 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 HSD17B13Q7Z5P4 300 aaPredicted RBP12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 LCN9Q8WX39 176 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 DNAJA3Q96EY1 480 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 CMTM3Q96MX0 182 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 ZNF426Q9BUY5 554 aa12.71□□□□□ -0.37
SCNN1A-215ENST00000540037 KNL1Q8NG31 2342 aa12.71□□□□□ -0.38
SCNN1A-215ENST00000540037 RBBP9O75884 186 aa12.71□□□□□ -0.38
SCNN1A-215ENST00000540037 MPGP29372 298 aa12.71□□□□□ -0.38
SCNN1A-215ENST00000540037 GGTLC2Q14390 218 aa12.71□□□□□ -0.38
SCNN1A-215ENST00000540037 LIPNQ5VXI9 398 aa12.71□□□□□ -0.38
SCNN1A-215ENST00000540037 USP53Q70EK8 1073 aa12.71□□□□□ -0.38
SCNN1A-215ENST00000540037 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.71□□□□□ -0.38
SCNN1A-215ENST00000540037 LINC00518Q8N0U6 118 aa12.71□□□□□ -0.38
SCNN1A-215ENST00000540037 OR51D1Q8NGF3 324 aa12.71□□□□□ -0.38
SCNN1A-215ENST00000540037 WNT2BQ93097 391 aa12.71□□□□□ -0.38
SCNN1A-215ENST00000540037 MNTQ99583 582 aa12.71□□□□□ -0.38
SCNN1A-215ENST00000540037 DNAJB12Q9NXW2 375 aaKnown RBP12.71□□□□□ -0.38
SCNN1A-215ENST00000540037 DPP7Q9UHL4 492 aa12.71□□□□□ -0.38
SCNN1A-215ENST00000540037 DCTN6O00399 190 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 CD3DP04234 171 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 CDKN2AP42771 156 aaKnown RBP12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 TSFMP43897 325 aaKnown RBP12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 MECP2P51608 486 aaKnown RBP12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 PGDP52209 483 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 ZNF169Q14929 603 aaPredicted RBP12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 LRRC37A5PQ49AS3 106 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 OR10K1Q8NGX5 313 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 NARS2Q96I59 477 aaKnown RBP12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 TBC1D29Q9UFV1 150 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 MRPS23Q9Y3D9 190 aaKnown RBP12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 TRAV14DV4A0A0A6YYC5 116 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms