RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 ZNF587Q96SQ5 575 aaPredicted RBP10.61□□□□□ -0.71
VTN-202ENST00000539746 TUBA1CQ9BQE3 449 aa10.61□□□□□ -0.71
VTN-202ENST00000539746 KATNB1Q9BVA0 655 aa10.61□□□□□ -0.71
VTN-202ENST00000539746 PTDSS2Q9BVG9 487 aa10.61□□□□□ -0.71
VTN-202ENST00000539746 PRRG4Q9BZD6 226 aa10.61□□□□□ -0.71
VTN-202ENST00000539746 RASSF1Q9NS23 344 aa10.61□□□□□ -0.71
VTN-202ENST00000539746 HAO2Q9NYQ3 351 aa10.61□□□□□ -0.71
VTN-202ENST00000539746 RNF6Q9Y252 685 aa10.61□□□□□ -0.71
VTN-202ENST00000539746 RCE1Q9Y256 329 aa10.61□□□□□ -0.71
VTN-202ENST00000539746 EXOSC1Q9Y3B2 195 aaKnown RBP10.61□□□□□ -0.71
VTN-202ENST00000539746 G3V3Y1 287 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 AQP7O14520 342 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 EIF1AYO14602 144 aaKnown RBP10.6□□□□□ -0.71
VTN-202ENST00000539746 IGHG3P01860 377 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 GNAO1P09471 354 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 SPINK2P20155 84 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 AQP2P41181 271 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 RPL5P46777 297 aaKnown RBP10.6□□□□□ -0.71
VTN-202ENST00000539746 RPS7P62081 194 aaKnown RBP10.6□□□□□ -0.71
VTN-202ENST00000539746 ACTA2P62736 377 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 ACTG2P63267 376 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 CXADRP78310 365 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 HSF1Q00613 529 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 GLO1Q04760 184 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 KRR1Q13601 381 aaKnown RBP10.6□□□□□ -0.71
VTN-202ENST00000539746 STK11Q15831 433 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 THEM4Q5T1C6 240 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 TMPRSS11AQ6ZMR5 421 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 YRDCQ86U90 279 aaKnown RBP10.6□□□□□ -0.71
VTN-202ENST00000539746 ZNF227Q86WZ6 799 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 GHDCQ8N2G8 530 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 POC1BQ8TC44 478 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 COPS4Q9BT78 406 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 WACQ9BTA9 647 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 RNF122Q9H9V4 155 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 KCNG2Q9UJ96 466 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 IER3IP1Q9Y5U9 82 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 PIEZO1Q92508 2521 aa10.6□□□□□ -0.71
VTN-202ENST00000539746 EXPH5Q8NEV8 1989 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 ARPC4-TTLL3A0A0A6YYG9 625 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 A0A1B0GVC2 190 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 FAM166BA8MTA8 275 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 AHRRA9YTQ3 701 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 KDM4EB2RXH2 506 aaPredicted RBP10.59□□□□□ -0.71
VTN-202ENST00000539746 PPP1R3DO95685 299 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 RAB36O95755 333 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 MAGEA5P43359 124 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 EIF1AXP47813 144 aaKnown RBP10.59□□□□□ -0.71
VTN-202ENST00000539746 TBR1Q16650 682 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 WIPI1Q5MNZ9 446 aaPredicted RBP10.59□□□□□ -0.71
VTN-202ENST00000539746 C1QTNF12Q5T7M4 302 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 SLC35D2Q76EJ3 337 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 MEPCEQ7L2J0 689 aaKnown RBP10.59□□□□□ -0.71
VTN-202ENST00000539746 KIF18BQ86Y91 864 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 LSM14AQ8ND56 463 aaKnown RBP10.59□□□□□ -0.71
VTN-202ENST00000539746 OR6X1Q8NH79 312 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 SMPDL3BQ92485 455 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 OTULINQ96BN8 352 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 WBP1Q96G27 269 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 SLC25A44Q96H78 314 aaPredicted RBP10.59□□□□□ -0.71
VTN-202ENST00000539746 TMEM80Q96HE8 168 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 MOGAT1Q96PD6 335 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 GPA33Q99795 319 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 MND1Q9BWT6 205 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 OR11A1Q9GZK7 315 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 CCDC90BQ9GZT6 254 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 FAM192AQ9GZU8 254 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 DEPPQ9NTK1 212 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 MRPS18AQ9NVS2 196 aaKnown RBP10.59□□□□□ -0.71
VTN-202ENST00000539746 FKBP7Q9Y680 259 aa10.59□□□□□ -0.71
VTN-202ENST00000539746 FIGNL2A6NMB9 653 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 HSPB2A8KAH6 182 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 MYL12BO14950 172 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 PLGP00747 810 aaPredicted RBP10.58□□□□□ -0.72
VTN-202ENST00000539746 ZNF708P17019 499 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 WT1P19544 449 aaPredicted RBP10.58□□□□□ -0.72
VTN-202ENST00000539746 PAX7P23759 505 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 HOXD11P31277 338 aaPredicted RBP10.58□□□□□ -0.72
VTN-202ENST00000539746 FMO3P31513 532 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 ACVR1BP36896 505 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 POLR2IP36954 125 aaKnown RBP10.58□□□□□ -0.72
VTN-202ENST00000539746 ST13P50502 369 aaKnown RBP10.58□□□□□ -0.72
VTN-202ENST00000539746 SLC16A1P53985 500 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 CASP6P55212 293 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 CLRN1P58418 232 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 TAS2R43P59537 309 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 POU3F1Q03052 451 aaPredicted RBP10.58□□□□□ -0.72
VTN-202ENST00000539746 HSPB2Q16082 182 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 TIMM50Q3ZCQ8 353 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 VASNQ6EMK4 673 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 TMEM154Q6P9G4 183 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 SHFQ7M4L6 423 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 KCTD20Q7Z5Y7 419 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 GPAT4Q86UL3 456 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 ZNF454Q8N9F8 522 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 EXD3Q8N9H8 876 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 TEX19Q8NA77 164 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 KDF1Q8NAX2 398 aaPredicted RBP10.58□□□□□ -0.72
VTN-202ENST00000539746 PROKR2Q8NFJ6 384 aa10.58□□□□□ -0.72
VTN-202ENST00000539746 OR52E2Q8NGJ4 325 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms